RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 C11orf70Q9BRQ4 267 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 DPP3Q9NY33 737 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 NXF1Q9UBU9 619 aaKnown RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 ANAPC7Q9UJX3 599 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 POLIQ9UNA4 740 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 FAM170AA1A519 330 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 TMEM88BA6NKF7 163 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 MYO1FO00160 1098 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 TREHO43280 583 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SART1O43290 800 aaKnown RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 RAD51CO43502 376 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 MED7O43513 233 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 CILPO75339 1184 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 PROSCO94903 275 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 HEXIM1O94992 359 aaKnown RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 MYBL2P10244 700 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 FGFR4P22455 802 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 BRD2P25440 801 aaKnown RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 MAN1A1P33908 653 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 RAD23BP54727 409 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 LACTBP83111 547 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 NNTQ13423 1086 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 ZBTB6Q15916 424 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 TAF2Q6P1X5 1199 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 EMBQ6PCB8 327 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 ALKAL1Q6UXT8 129 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 MMS22LQ6ZRQ5 1243 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 PASD1Q8IV76 773 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 ZNF784Q8NCA9 323 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 WHAMMQ8TF30 809 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 TFAP2BQ92481 460 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 HPDLQ96IR7 371 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 ZIC5Q96T25 663 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 MTG1Q9BT17 334 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 AP1M1Q9BXS5 423 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SDCBP2Q9H190 292 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 PARVAQ9NVD7 372 aa15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.23■□□□□ 0.03
RTFDC1-201ENST00000023939 RALGAPA2Q2PPJ7 1873 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 GOLGA6L10A0A0M3HER8 536 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 TCRBV5S1A1TA0A578 114 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 POLR2BP30876 1174 aaKnown RBP15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 PSMC4P43686 418 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 MARCKSL1P49006 195 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 EPHB4P54760 987 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 RWDD2BP57060 319 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 TMEM62Q0P6H9 643 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 INCA1Q0VD86 236 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 SCARA5Q6ZMJ2 495 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 MAATS1Q7Z4T9 603 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 KLHL7Q8IXQ5 586 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 C7orf31Q8N865 590 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 CCDC26Q8TAB7 109 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 CAVIN3Q969G5 261 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 KIF12Q96FN5 646 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 BTBD6Q96KE9 485 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 CNTN3Q9P232 1028 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 AGAP1Q9UPQ3 857 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 CEP83Q9Y592 693 aa15.22■□□□□ 0.03
RTFDC1-201ENST00000023939 ITGA4P13612 1032 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 YARSP54577 528 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 TAP1Q03518 808 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 PAK2Q13177 524 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 SEL1L2Q5TEA6 688 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 WDTC1Q8N5D0 677 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 FEZF2Q8TBJ5 459 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 SEC14L1Q92503 715 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 TRIB2Q92519 343 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 PLVAPQ9BX97 442 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 EIF2AQ9BY44 585 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 KIAA1257Q9ULG3 409 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 GINS2Q9Y248 185 aa15.21■□□□□ 0.03
RTFDC1-201ENST00000023939 GSCP56915 257 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 CBX1P83916 185 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 ZNF200P98182 395 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 GUCY2DQ02846 1103 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 ZNF211Q13398 564 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 CUL1Q13616 776 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 XKR4Q5GH76 650 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 LRRC52Q8N7C0 313 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 SLC4A11Q8NBS3 891 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 TMEM40Q8WWA1 233 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 DDX47Q9H0S4 455 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 ACBD3Q9H3P7 528 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 SMYD3Q9H7B4 428 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 EPB41L5Q9HCM4 733 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 SNTG2Q9NY99 539 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 MYADML2A6NDP7 307 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 TMEM191CA6NGB0 347 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 KIF3CO14782 793 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 SEPT4O43236 478 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 RPLP2P05387 115 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 C6orf222P0C671 652 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 PYGMP11217 842 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 FLT3LGP49771 235 aa15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 MRPS25P82663 173 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 PTPN11Q06124 597 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-201ENST00000023939 MYO1EQ12965 1108 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms