RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Tuba8Q9JJZ2 449 aa11.13□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gabbr1Q9WV18 960 aa11.13□□□□□ -0.63
Ptpre-208ENSMUST00000211788 PhipQ8VDD9 1821 aaKnown RBP11.13□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Dhtkd1A2ATU0 921 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Clca3bE9PUL3 1044 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Il2rbP16297 539 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 TxkP42682 527 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 LipeP54310 759 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 G3bp2P97379 482 aaKnown RBP11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gm1604bQ3TRG0 118 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Palb2Q3U0P1 1104 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 KizQ3UXL4 695 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tspyl3Q3UYP3 334 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 OgdhQ60597 1023 aaKnown RBP11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Uts2bQ765I1 113 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tor4aQ8BH02 426 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Cep57Q8CEE0 500 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gstm4Q8R5I6 218 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 SfpqQ8VIJ6 699 aaKnown RBP11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Ces1fQ91WU0 561 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Mettl13Q91YR5 698 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Dnajc3Q91YW3 504 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tlr3Q99MB1 905 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Klhl35Q9CZ49 574 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Cst12Q9DAN8 128 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Grk1Q9WVL4 564 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Zscan4-ps3A0A1B0GRH6 506 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Zscan4-ps2A0A1C7CYU6 506 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Nup62clA2AG10 272 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Hsf3D0VYS2 492 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Prom1O54990 867 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Epha3P29319 983 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Oprl1P35377 367 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Il1rapl1P59823 695 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 RelaQ04207 549 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 HelqQ2VPA6 1069 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Drc1Q3USS3 753 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Syne3Q4FZC9 975 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Xlr3aQ60595 226 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Satb1Q60611 764 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tll1Q62381 1013 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Foxo6Q70KY4 559 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Plppr4Q7TME0 766 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Cyp2d26Q8CIM7 500 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 RnpepQ8VCT3 650 aaKnown RBP11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Q9D2Q3 444 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Rnf225Q9D7D1 332 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gpatch1Q9DBM1 930 aa11.12□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Wdr72D3YYM4 1114 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 GnazO70443 355 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Cyp2b9P12790 491 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Rag1P15919 1040 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tnni3P48787 211 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Kpnb1P70168 876 aaKnown RBP11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Ttc39dQ0VF76 604 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gm3414Q3TNU4 584 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Trappc3lQ4KL14 181 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Ctc1Q5SUQ9 1212 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Sema5aQ62217 1077 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Jade3Q6IE82 823 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Zdhhc24Q6IR37 284 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 SpopQ6ZWS8 374 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Trpv1Q704Y3 839 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Q8BGD0 127 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Washc5Q8C2E7 1159 aaKnown RBP11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Ccdc15Q8C9M2 810 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Pcdha2Q91Y17 948 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Mrps5Q99N87 432 aaKnown RBP11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Igf2bp3Q9CPN8 579 aaKnown RBP11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Zfp623Q9CY99 499 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tubgcp4Q9D4F8 667 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 IkbipQ9DBZ1 373 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Ngly1Q9JI78 651 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Arih1Q9Z1K5 555 aa11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Myh10Q61879 1976 aaKnown RBP11.11□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tbc1d16A2ABG4 766 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Mmrn2A6H6E2 943 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gm4297D3YWB7 211 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Fam47eD3YWC7 402 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gml2G5E8L7 176 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Timm44O35857 452 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gdap1O88741 358 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Lta4hP24527 611 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Gm10392Q3V3I3 114 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Vav2Q60992 868 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Fgd5Q80UZ0 1219 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Btbd9Q8C726 612 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Inpp5fQ8CDA1 1132 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 D630039A03RikQ8K0M7 236 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Fermt3Q8K1B8 665 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 ItpkaQ8R071 459 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Tspan8Q8R3G9 235 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Olfr1499Q8VG65 314 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Pcdha3Q91Y16 942 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Psmd6Q99JI4 389 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Rnaseh2aQ9CWY8 301 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Cnot8Q9D8X5 292 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Rtn3Q9ES97 964 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 IdeQ9JHR7 1019 aa11.1□□□□□ -0.63
Ptpre-208ENSMUST00000211788 Rilpl1Q9JJC6 406 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms