RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Vmn1r203Q8R273 311 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Scn1aA2APX8 2009 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Map7d2A2AG50 781 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gm10721J3QPJ9 223 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Sept4P28661 478 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 PrkczQ02956 592 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Cntnap5bQ0V8T8 1292 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Pi4k2aQ2TBE6 479 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Celf4Q7TSY6 486 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Creb3l2Q8BH52 521 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Dr1Q91WV0 176 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Lztr1Q9CQ33 837 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Slc6a21A0A1B0GSD2 748 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Slc4a11A2AJN7 862 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Vmn2r55G3UWZ4 781 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Vmn2r53L7N473 806 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 PtgisO35074 501 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 RarbP22605 482 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Tp53i13Q5F267 385 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Fhod1Q6P9Q4 1197 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 GmipQ6PGG2 971 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 PoliQ6R3M4 717 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Mrgprb8Q7TN51 330 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Kbtbd3Q8BHI4 607 aa27.31■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gm3182K7N6T8 263 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Kif3cO35066 796 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 JchainP01592 159 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Epha3P29319 983 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 SPINDOCQ05AH6 381 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Agbl1Q09M05 972 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Trim21Q62191 470 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Agbl2Q8CDK2 862 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Vmn1r64Q8R2B8 320 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Chst12Q99LL3 419 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Micu3Q9CTY5 523 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Cul2Q9D4H8 745 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Capn12Q9ER56 720 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gm42688A0A0R3P9D1 673 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zscan4-ps1A0A1C7CYV3 506 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zscan4dA7KBS4 506 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gm3164L7N2B9 238 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gm3264L7N2C5 238 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Shmt1P50431 478 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zscan4fQ3URS2 506 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 PighQ5M9N4 188 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Q5XFZ0 217 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Tspyl5Q69ZB3 406 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Arhgap10Q6Y5D8 786 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zscan4cQ80VJ6 506 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Q80ZQ3 298 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Ccdc142Q8CAI1 738 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Fam193aQ8CGI1 1231 aaKnown RBP27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Senp2Q91ZX6 588 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Eps8l2Q99K30 729 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Tubgcp4Q9D4F8 667 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 MsraQ9D6Y7 233 aa27.3■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Znf804aA2AKY4 1200 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Vmn2r17E9PYF5 849 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 ChkbO55229 394 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Abcb1bP06795 1276 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Xrcc6P23475 608 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Acsl1P41216 699 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Smarcad1Q04692 1021 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Hdgfl1Q2VPR5 283 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zmym1Q3TJB1 983 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Q3UE31 404 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Cracr2aQ3UP38 310 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Phlda1Q62392 405 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Impg2Q80XH2 1243 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Pum3Q8BKS9 647 aaKnown RBP27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Fermt3Q8K1B8 665 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 LrmdaQ9D9B4 229 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 PigoQ9JJI6 1093 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Cul1Q9WTX6 776 aa27.29■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Vmn2r121A2BE32 847 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Krt28A6BLY7 462 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gm1661E9Q963 441 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 SftpdP50404 374 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Usp10P52479 792 aaKnown RBP27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Dlg3P70175 849 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Ect2Q07139 913 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Plk1Q07832 603 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Fsd1lQ8BYN5 507 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Caskin2Q8VHK1 1201 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Thap12Q9CUX1 758 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Bbs5Q9CZQ9 341 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Lrrc71Q9D3W5 558 aa27.28■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Kif2aP28740 705 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Nr2c2P49117 596 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zdhhc24Q6IR37 284 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Ttyh3Q6P5F7 524 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Camta2Q80Y50 1208 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Rhot1Q8BG51 631 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Phtf2Q8CB19 747 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Zdhhc3Q8R173 299 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Pcyox1Q9CQF9 505 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gstt4Q9D4P7 240 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Satl1Q9D5N8 744 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Spint1Q9R097 507 aa27.27■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Tldc2A2ACG1 198 aa27.27■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms