RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Tle2Q9WVB2 767 aa22.54■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Itgb3O54890 787 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Ifnb1P01575 182 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Shmt1P50431 478 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 LipeP54310 759 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Trim43aQ3TL54 445 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Klra5Q60652 266 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Fam109aQ8BH49 266 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Tada3Q8R0L9 432 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 B4galt3Q91YY2 395 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 DarsQ922B2 501 aaKnown RBP22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Golph3Q9CRA5 298 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Cndp2Q9D1A2 475 aaKnown RBP22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Sfmbt1Q9JMD1 863 aa22.53■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Gm12394A2AKP6 982 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 CaluO35887 315 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 XlrP05531 208 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Pdia4P08003 638 aaKnown RBP22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Rhox5P52651 210 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 MlxipQ2VPU4 917 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Syce2Q505B8 171 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Lrfn2Q80TG9 788 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 R3hdm2Q80TM6 1044 aaKnown RBP22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 MogsQ80UM7 834 aaKnown RBP22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Trpv6Q91WD2 767 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Cnot8Q9D8X5 292 aa22.52■■□□□ 1.2
Ccdc88a-202ENSMUST00000109477 Gm28919A0A087WP35 240 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gm4756A0A140LIS8 335 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gm8994E9PV04 411 aaKnown RBP22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Hsd17b14E9Q3D4 273 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Abcb1bP06795 1276 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Nap1l1P28656 391 aaKnown RBP22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Dpep1P31428 410 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mybl1P51960 751 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 EnahQ03173 802 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mysm1Q69Z66 819 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Trim37Q6PCX9 961 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Olfr30Q8VGD8 315 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Clstn3Q99JH7 956 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Slamf8Q9D3G2 278 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gstt4Q9D4P7 240 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Wfdc1Q9ESH5 211 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mta2Q9R190 668 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ankrd2Q9WV06 328 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Zfp358E9Q8M1 571 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Nr3c1P06537 783 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Rps6ka1P18653 724 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Capza3P70190 299 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Smyd1P97443 490 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Prdx5P99029 210 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Hhla1Q3TYV2 514 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Uimc1Q5U5Q9 727 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Znf235Q61116 645 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Zfyve28Q6ZPK7 905 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lsm8Q6ZWM4 96 aaKnown RBP22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Vat1lQ80TB8 417 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 SowahaQ8BLS7 548 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Serpina3bQ8BYY9 420 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Myef2Q8C854 591 aaKnown RBP22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Lonp1Q8CGK3 949 aaKnown RBP22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ubxn6Q99PL6 442 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Pcyox1Q9CQF9 505 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Med7Q9CZB6 233 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Mgea5Q9EQQ9 916 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 IdeQ9JHR7 1019 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Kcnq4Q9JK97 696 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Krt17Q9QWL7 433 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 DgkeQ9R1C6 564 aa22.51■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Slc35g2D3YVE8 412 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gm4302E9PX25 294 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 CraddO88843 199 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Eef1dP57776 281 aaKnown RBP22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Emc10Q3TAS6 258 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 P3h1Q3V1T4 739 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Bcar1Q61140 874 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Arl5cQ6P068 179 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gpr156Q6PCP7 798 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 CyldQ80TQ2 952 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Llgl1Q80Y17 1036 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Tor4aQ8BH02 426 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Unc45bQ8CGY6 931 aaKnown RBP22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ccdc91Q9D8L5 442 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 IvdQ9JHI5 424 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Arhgef10Q8C033 1345 aa22.5■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Obsl1D3YYU8 1804 aaKnown RBP22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ttc3O88196 1979 aaKnown RBP22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Fpr-rs4A4FUQ5 323 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Gm8882E9Q7E4 283 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Impa1O55023 277 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 AdkP55264 361 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Znf800Q0VEE6 662 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Fam109bQ14B98 259 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Ptcd3Q14C51 685 aaKnown RBP22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 HarsQ61035 509 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 TxlnaQ6PAM1 554 aaKnown RBP22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Olfr389Q7TRX7 312 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Aste1Q8BIR2 672 aa22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Nop53Q8BK35 484 aaKnown RBP22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Pum3Q8BKS9 647 aaKnown RBP22.49■■□□□ 1.19
Ccdc88a-202ENSMUST00000109477 Slc9a7Q8BLV3 726 aa22.49■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms