RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Srpk1O70551 648 aaKnown RBP10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Nr5a1P33242 462 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Serpina1eQ00898 413 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Olfr798Q7TRH8 311 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Phf24Q80TL4 400 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Suz12Q80U70 741 aaKnown RBP10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 SympkQ80X82 1284 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ccdc113Q8C5T8 377 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 CnstQ8CBC4 711 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Snap47Q8R570 413 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Krt79Q8VED5 531 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Olfr805Q8VFI4 319 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Olfr807Q8VGI9 311 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Satb2Q8VI24 733 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 HnrnpabQ99020 285 aaKnown RBP10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ttc5Q99LG4 440 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Lrrc18Q9CQ07 262 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ddx28Q9CWT6 540 aaKnown RBP10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Mcm8Q9CWV1 833 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cd302Q9DCG2 228 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Dnaja2Q9QYJ0 412 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 St6galnac1Q9QZ39 526 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Racgap1Q9WVM1 628 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Mapk13Q9Z1B7 366 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 HnrnpfQ9Z2X1 415 aaKnown RBP10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Kcnq2Q9Z351 759 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm29106A0A087WSP8 697 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Unc13dB2RUP2 1085 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Adamts6D3Z1A5 1117 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 SpxD3Z752 116 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm28043E0CXC2 719 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Krt83E9Q1Y9 479 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 BhmtO35490 407 aaKnown RBP10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Hcn3O88705 779 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cdh2P15116 906 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Arhgap45Q3TBD2 1116 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 HexdcQ3U4H6 486 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cmpk2Q3U5Q7 447 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Olfr832Q7TRG9 312 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ube2q1Q7TSS2 422 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ints8Q80V86 995 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tmem121Q80XA0 318 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cdkn2aipQ8BI72 563 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cdh7Q8BM92 785 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 PpatQ8CIH9 517 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cbx7Q8VDS3 158 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Hars2Q99KK9 505 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Sytl1Q99N80 567 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 S100a14Q9D2Q8 104 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Slc13a2Q9ES88 586 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Arl6ip4Q9JM93 229 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tmed2Q9R0Q3 201 aa10.23□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Iqca1lA6H690 825 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Kif28pD3YXS5 1028 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Pcdhb9E9Q5G2 828 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 OmdO35103 423 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 TxkP42682 527 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Klf1P46099 358 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Pdcd2P46718 343 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Mybl2P48972 704 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cav1P49817 178 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Lrrc74bQ14BP6 391 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Arhgap20Q6IFT4 1182 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Bend6Q6PFX2 281 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Rhbdf1Q6PIX5 856 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Efr3bQ6ZQ18 817 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Olfr834Q7TRG8 312 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ssx2ipQ8VC66 615 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Lrrc17Q9CXD9 443 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Krt28A6BLY7 462 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gm3696K7N751 203 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gsg1l2M0QWL6 290 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 IkbkgO88522 412 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cyp4a10O88833 509 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 PtpraP18052 829 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Hsd17b4P51660 735 aaKnown RBP10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gjb4Q02738 266 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Agxt2Q3UEG6 513 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Adrbk2Q3UYH7 688 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Gpbp1Q6NXH3 473 aaKnown RBP10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Bbs9Q811G0 885 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ppm1lQ8BHN0 360 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Grsf1Q8C5Q4 479 aaKnown RBP10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cplx3Q8R1B5 158 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Znf426Q8R1D1 550 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 ChiaQ91XA9 473 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 L2hgdhQ91YP0 464 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Trim33Q99PP7 1142 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Ttc14Q9CSP9 761 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tex47Q9D5W8 253 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Dusp21Q9D9D8 189 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 CtsjQ9R014 334 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Spo11Q9WTK8 396 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Tiam2Q6ZPF3 1715 aa10.22□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Farp1F8VPU2 1048 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 DdcO88533 480 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Chrnb1P09690 501 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Cyp2d9P11714 504 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 Msh3P13705 1091 aa10.21□□□□□ -0.77
Hmgb1-201ENSMUST00000085546 MatkP41242 505 aa10.21□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms