RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Pspc1Q8R326 523 aaKnown RBP11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Akr1b1P45376 316 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Q6DFW0 481 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ints2Q80UK8 1198 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Clca2Q8BG22 942 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Zbtb44Q8R0A2 453 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Adck1Q9D0L4 525 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Znf654Q9DAU9 571 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 PuraP42669 321 aaKnown RBP11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Scg3P47867 471 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ripk2P58801 539 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ankmy2Q3TPE9 440 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rsbn1Q80T69 795 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Cdk8Q8R3L8 464 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Dnajc5bQ9CQ94 199 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Lyrm1Q9CQB7 122 aa11.18□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Prss51A0A286YDY8 319 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Phf11A6H5X4 337 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Nfatc2ipO09130 412 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Pdk4O70571 412 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rasa2P58069 847 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Dok7Q18PE0 504 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Tas2r109Q7M707 316 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ric8bQ80XE1 520 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ankrd23Q812A3 306 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Slc35g1Q8BY79 368 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Sorcs3Q8VI51 1219 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm11549A0A286YD83 63 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ifi207E9Q3L4 978 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm2237E9Q501 211 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm3383J3QQ59 259 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm3591K7N6X2 186 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm3164L7N2B9 238 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm3239L7N2D9 227 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ccnd2P30280 289 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Trim67Q505D9 768 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Tbx2Q60707 711 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Wnk4Q80UE6 1222 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Mup21Q80YX8 181 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ddx39aQ8VDW0 427 aaKnown RBP11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 DtnaQ9D2N4 746 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 PigrO70570 771 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Orc4O88708 433 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Hoxb8P09632 243 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Pkn1P70268 946 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ccndbp1Q3TVC7 356 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 PigsQ6PD26 555 aaKnown RBP11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Vcpip1Q8CDG3 1220 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Cnot3Q8K0V4 751 aaKnown RBP11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Them5Q9CQJ0 248 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Sugt1Q9CX34 336 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ice1E9Q286 2241 aaKnown RBP11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Otud6aQ6IE21 290 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Cfap206Q6PE87 622 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 KhnynQ80U38 671 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Snx17Q8BVL3 470 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 TbcelQ8C5W3 424 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 ItchQ8C863 864 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Trim8Q99PJ2 551 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Trim13Q9CYB0 407 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Kcnq5Q9JK45 933 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Prr5lA2AVJ5 370 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Lmnb1P14733 588 aaKnown RBP11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Setd4P58467 439 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ddx17Q501J6 650 aaKnown RBP11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Psmd9Q9CR00 222 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Mrps15Q9DC71 258 aaKnown RBP11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 PfasQ5SUR0 1337 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Mroh1E0CZ22 1640 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 PplQ9R269 1755 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rrn3B2RS91 656 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Atp6v1g3Q8BMC1 118 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Znf467Q8JZL0 594 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 OafQ8QZR4 282 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 ZwilchQ8R060 589 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Dnajc28Q8VCE1 385 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm2832F7AEC7 200 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 A430089I19RikQ8C9W1 407 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Zbed3Q9D0L1 228 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Psma4Q9R1P0 261 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Slc22a3Q9WTW5 551 aa11.17□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Tmem2Q5FWI3 1383 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Serpinb3cA2RSF9 386 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Olfm1O88998 485 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rps6P62754 249 aaKnown RBP11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Pstpip1P97814 415 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Atp13a5Q3TYU2 1216 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Scfd2Q8BTY8 684 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Vps50Q8CI71 964 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ssh3Q8K330 649 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Senp2Q91ZX6 588 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Trpm5Q9JJH7 1158 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 4930579F01RikE9Q3L6 325 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Meis1Q60954 390 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Nup93Q8BJ71 819 aaKnown RBP11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Cog4Q8R1U1 785 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rnf31Q924T7 1066 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Kdm8Q9CXT6 414 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 MajinQ9D992 256 aa11.16□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rnf19bA2A7Q9 732 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms