RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Olfr1353Q8VGU8 309 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Mrpl9Q99N94 265 aaKnown RBP18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 PrameQ9D4Z5 464 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Utp3Q9JI13 469 aaKnown RBP18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Actn2Q9JI91 894 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Dnajb1Q9QYJ3 340 aaKnown RBP18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Noc2lQ9WV70 747 aaKnown RBP18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 SpaarA0A1B0GSZ0 75 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 4933406M09RikG3XA12 479 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Tpd52l1O54818 204 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 TyrP11344 533 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Folr1P35846 255 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Rgs9bpQ148R9 237 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Lrrc47Q505F5 581 aaKnown RBP18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Pla2g4cQ64GA5 597 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Herc4Q6PAV2 1057 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Smarcd2Q99JR8 531 aaKnown RBP18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 HgsQ99LI8 775 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Yaf2Q99LW6 179 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Ears2Q9CXJ1 523 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Ankef1Q9D2J7 775 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Dpysl5Q9EQF6 564 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Adam23Q9R1V7 829 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Sema4fQ9Z123 777 aa18.23■□□□□ 0.51
Trim54-201ENSMUST00000013771 Cacna1gQ5SUF7 2381 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 F8Q06194 2319 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 XntrpcF8VQM8 1264 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Taf4bG5E8Z2 855 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Calhm3J3QMI4 347 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Stk10O55098 966 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Adamts8P57110 905 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Cpne7Q0VE82 557 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Grm2Q14BI2 872 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Nek10Q3UGM2 1111 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Spire1Q52KF3 598 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Haus7Q8BKT8 364 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Osbpl6Q8BXR9 959 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Q8C4P0 716 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Zdhhc7Q91WU6 308 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 CactinQ9CS00 772 aaKnown RBP18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Dnaaf1Q9D2H9 634 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Erich6bQ9D4S6 220 aa18.22■□□□□ 0.51
Trim54-201ENSMUST00000013771 Scn1aA2APX8 2009 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 MgamB5THE2 1827 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Gm11758A2BEI6 360 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Gm11757A2BEI8 360 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Gm1661E9Q963 441 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Enpp1P06802 906 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Msh3P13705 1091 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 AdssP46664 456 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Kiaa1468Q148V7 1216 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Cntn2Q61330 1040 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Ltbp3Q61810 1268 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Snx13Q6PHS6 957 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Camsap3Q80VC9 1252 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Dlg2Q91XM9 852 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Pde6cQ91ZQ1 861 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Snw1Q9CSN1 536 aaKnown RBP18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Atad1Q9D5T0 361 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Rpl4Q9D8E6 419 aaKnown RBP18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Atp6v0a1Q9Z1G4 839 aaKnown RBP18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Dmxl1Q6PNC0 3013 aa18.21■□□□□ 0.51
Trim54-201ENSMUST00000013771 Ighv11-2A0A075B5R8 117 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Slc4a11A2AJN7 862 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Gm42957D6RFQ2 366 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Stx1aO35526 288 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Rasa2P58069 847 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Prdx5P99029 210 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 VegfaQ00731 214 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Mtf2Q02395 593 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Sox8Q04886 464 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Prl2c1Q5SVL9 228 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Krt14Q61781 484 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Pum1Q80U78 1189 aaKnown RBP18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Q8BGN9 141 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 B130006D01RikQ8BRH6 153 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 AgmoQ8BS35 447 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Strip2Q8C9H6 844 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Znf830Q8R1N0 363 aaKnown RBP18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Zdhhc5Q8VDZ4 715 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 CalcbQ99MP3 130 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Oxct2bQ9ESL0 520 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Oxct2aQ9JJN4 520 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Tspan3Q9QY33 253 aa18.2■□□□□ 0.5
Trim54-201ENSMUST00000013771 Gm10134F6ZQC6 126 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Gm10801F7C7Q0 168 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Itgb3O54890 787 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Rdh7O88451 316 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Fam167bP17257 162 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Npr1P18293 1057 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Tpm3P21107 285 aaKnown RBP18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Tmprss15P97435 1069 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Serac1Q3U213 654 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Srbd1Q497V5 1015 aaKnown RBP18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 R3hdm4Q4VBF2 262 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Znf354cQ571J5 560 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Sp9Q64HY3 484 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Igdcc3Q8BQC3 813 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Ccdc169Q8BXX9 214 aa18.19■□□□□ 0.5
Trim54-201ENSMUST00000013771 Gucd1Q8BZI6 239 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms