RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SPECC1LQ69YQ0 1117 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 TMC6Q7Z403 805 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 ZNF280BQ86YH2 543 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 COLGALT2Q8IYK4 626 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 ZNF689Q96CS4 500 aaPredicted RBP13.9□□□□□ -0.18
PHGDH-218ENST00000641491 VWCEQ96DN2 955 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 MRFAP1L1Q96HT8 127 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 SNX25Q9H3E2 840 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 MIOSQ9NXC5 875 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 APEX2Q9UBZ4 518 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 ADAM28Q9UKQ2 775 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 MRPL42Q9Y6G3 142 aaKnown RBP13.9□□□□□ -0.18
PHGDH-218ENST00000641491 EYSQ5T1H1 3165 aa13.9□□□□□ -0.18
PHGDH-218ENST00000641491 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 NRP1O14786 923 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 KIF4AO95239 1232 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 PTMAP06454 111 aaKnown RBP13.89□□□□□ -0.19
PHGDH-218ENST00000641491 KRT5P13647 590 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 USP8P40818 1118 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 SLC11A1P49279 550 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 AFF1P51825 1210 aaKnown RBP13.89□□□□□ -0.19
PHGDH-218ENST00000641491 RABGGTBP53611 331 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 HTRA4P83105 476 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-218ENST00000641491 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-218ENST00000641491 DSC1Q08554 894 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 NR1I3Q14994 352 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 ZBTB6Q15916 424 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 EPC2Q52LR7 807 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 C1orf220Q5T0J3 134 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 PDXDC1Q6P996 788 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 TRIM65Q6PJ69 517 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 KCNT2Q6UVM3 1135 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 THEM5Q8N1Q8 247 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 COLGALT1Q8NBJ5 622 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 GSTCDQ8NEC7 633 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 NAP1L5Q96NT1 182 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-218ENST00000641491 ERGIC2Q96RQ1 377 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 PI4K2AQ9BTU6 479 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 SLC28A3Q9HAS3 691 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 UBE2TQ9NPD8 197 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-218ENST00000641491 ZNHIT6Q9NWK9 470 aaKnown RBP13.89□□□□□ -0.19
PHGDH-218ENST00000641491 MICAL3Q7RTP6 2002 aa13.89□□□□□ -0.19
PHGDH-218ENST00000641491 PIRO00625 290 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 CYB561D2O14569 222 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 TEX33O43247 280 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 DDHD2O94830 711 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
PHGDH-218ENST00000641491 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
PHGDH-218ENST00000641491 GALTP07902 379 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 PON1P27169 355 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 C15orf39Q6ZRI6 1047 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-218ENST00000641491 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 TMEM86AQ8N2M4 240 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 RABGGTAQ92696 567 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 FAXDC2Q96IV6 333 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
PHGDH-218ENST00000641491 C11orf84Q9BUA3 381 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-218ENST00000641491 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
PHGDH-218ENST00000641491 CYP3A43Q9HB55 503 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 PLCB1Q9NQ66 1216 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 DNAJB4Q9UDY4 337 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 COQ4Q9Y3A0 265 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 RALGAPA2Q2PPJ7 1873 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 ITIH6Q6UXX5 1313 aa13.88□□□□□ -0.19
PHGDH-218ENST00000641491 MUC3AQ02505 3323 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 ANO9A1A5B4 782 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 NT5C1B-RDH14C9J2C7 533 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 H7C4K7 107 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-218ENST00000641491 VNN1O95497 513 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 CST3P01034 146 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-218ENST00000641491 URODP06132 367 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 CA3P07451 260 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 CD58P19256 250 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 SLC9A1P19634 815 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 LILRA4P59901 499 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
PHGDH-218ENST00000641491 GCNT1Q02742 428 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 CREMQ03060 361 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 CUL2Q13617 745 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 ARHGAP44Q17R89 818 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 FUT10Q6P4F1 479 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 ADGRF2Q8IZF7 708 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 TOP6BLQ8N6T0 577 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 MYLIPQ8WY64 445 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 SENP8Q96LD8 212 aa13.87□□□□□ -0.19
PHGDH-218ENST00000641491 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms