RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SNCAIPQ9Y6H5 919 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 WASF2Q9Y6W5 498 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 PEX11AO75192 247 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 SLC12A3P55017 1021 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 SEL1L2Q5TEA6 688 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 LRRC8BQ6P9F7 803 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 DSTYKQ6XUX3 929 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 AGGF1Q8N302 714 aaeCLIP12.54□□□□□ -0.46e-8■■■■■ 35.7
RBFOX1-224ENST00000641259 MREGQ8N565 214 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 REPS2Q8NFH8 660 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 MAF1Q9H063 256 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 DCLRE1BQ9H816 532 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 RPTORQ8N122 1335 aa12.54□□□□□ -0.4
RBFOX1-224ENST00000641259 C5orf60A6NFR6 353 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 PSMD10O75832 226 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 OR6B1O95007 311 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 TJP3O95049 919 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 AGTP01019 485 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 RTP1P59025 263 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 STRN3Q13033 797 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 NAB2Q15742 525 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 OTOP1Q7RTM1 612 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 JAMLQ86YT9 394 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 C1orf54Q8WWF1 131 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 WDR11Q9BZH6 1224 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 SYNCQ9H7C4 482 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 ZWILCHQ9H900 591 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 CYP4F11Q9HBI6 524 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 AFG3L2Q9Y4W6 797 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 TBX3O15119 743 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 COQ9O75208 318 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 PLA2G4BP0C869 781 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 ATP5DP30049 168 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 PGM1P36871 562 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 MAGEA8P43361 318 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 PTK2Q05397 1052 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 MEI1Q5TIA1 1274 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 UNC13DQ70J99 1090 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 NME8Q8N427 588 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 NDE1Q9NXR1 346 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 ARMCX1Q9P291 453 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 TRAF3IP3Q9Y228 551 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 IVNS1ABPQ9Y6Y0 642 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 RPS6P62753 249 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 PLCB3Q01970 1234 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 C6orf183Q5T699 404 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 IYDQ6PHW0 289 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 SYTL5Q8TDW5 730 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 SLC26A7Q8TE54 656 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 FNBP1Q96RU3 617 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 POP1Q99575 1024 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 ADARB2Q9NS39 739 aaKnown RBP12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
RBFOX1-224ENST00000641259 CCDC188H7C350 402 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 LIN7AO14910 233 aaPredicted RBP12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 TROVE2P10155 538 aaKnown RBP eCLIP12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 CYP11B2P19099 503 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 MLH1P40692 756 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 GJA8P48165 433 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 CEP55Q53EZ4 464 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 TREML2Q5T2D2 321 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 GJB7Q6PEY0 223 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 FAM20AQ96MK3 541 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 EIF2AK1Q9BQI3 630 aaKnown RBP12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 THTPAQ9BU02 230 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 LCTP09848 1927 aa12.52□□□□□ -0.4
RBFOX1-224ENST00000641259 TRIM43BA6NCK2 446 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 ENO1P06733 434 aaKnown RBP12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 ALOX15P16050 662 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 PIK3CAP42336 1068 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 CTTNQ14247 550 aaKnown RBP12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 TMEM132BQ14DG7 1078 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 CYTH1Q15438 398 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 SLC18A3Q16572 532 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 ZNF746Q6NUN9 644 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 PRUNE1Q86TP1 453 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 EXOC3L1Q86VI1 746 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 SMC1BQ8NDV3 1235 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 RUBCNQ92622 972 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 SLC5A5Q92911 643 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 IQCDQ96DY2 449 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 TUBGCP5Q96RT8 1024 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 ERP44Q9BS26 406 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 GINM1Q9NU53 330 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 MARCOQ9UEW3 520 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 KDM3AQ9Y4C1 1321 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 H3BRJ5 948 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 HAUS5O94927 633 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 GSTA2P09210 222 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 RPA1P27694 616 aa12.52□□□□□ -0.41
RBFOX1-224ENST00000641259 TMED10P49755 219 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms