RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 HOXC6P09630 235 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 HPDP32754 393 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 SLC26A2P50443 739 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 SGSM1Q2NKQ1 1148 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 MPZL3Q6UWV2 235 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 ART4Q93070 314 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 FZD8Q9H461 694 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 MTRF1LQ9UGC7 380 aaKnown RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 SCINQ9Y6U3 715 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 O00370 1275 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 ACKR2O00590 384 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 PSTPIP1O43586 416 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 NUDT17P0C025 328 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 MDH1P40925 334 aaKnown RBP18.15■□□□□ 0.5
PHGDH-211ENST00000641213 TAS2R40P59535 323 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 SNX1Q13596 522 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 TFDP1Q14186 410 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 SKIDA1Q1XH10 827 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 KRT71Q3SY84 523 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 ATF7IP2Q5U623 682 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 EFCAB12Q6NXP0 572 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 THNSL1Q8IYQ7 743 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 MAIP1Q8WWC4 291 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 ZBTB10Q96DT7 871 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 NLRP4Q96MN2 994 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 RABEP2Q9H5N1 569 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 CHST7Q9NS84 486 aa18.15■□□□□ 0.5
PHGDH-211ENST00000641213 BCCIPQ9P287 314 aaKnown RBP eCLIP18.15■□□□□ 0.5
PHGDH-211ENST00000641213 TLR3O15455 904 aaKnown RBP18.14■□□□□ 0.5
PHGDH-211ENST00000641213 B4GALT5O43286 388 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 ZEB2O60315 1214 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 HBP1O60381 514 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 CD58P19256 250 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 LSP1P33241 339 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 TFAMQ00059 246 aaKnown RBP18.14■□□□□ 0.5
PHGDH-211ENST00000641213 IFFO1Q0D2I5 559 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 TTLL4Q14679 1199 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 PPP1R7Q15435 360 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 RHOT1Q8IXI2 618 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 ARFGAP2Q8N6H7 521 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-211ENST00000641213 RNF25Q96BH1 459 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-211ENST00000641213 CISHQ9NSE2 258 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 PARVAQ9NVD7 372 aa18.14■□□□□ 0.5
PHGDH-211ENST00000641213 INO80B-WBP1J3KQ70 363 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 GJB6O95452 261 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 SHBGP04278 402 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 MMP8P22894 467 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 CLCN3P51790 818 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 KRT17Q04695 432 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 TRPC3Q13507 836 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 ZNF568Q3ZCX4 644 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 C9orf131Q5VYM1 1079 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 EEF1DP3Q658K8 133 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 USP50Q70EL3 339 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-211ENST00000641213 SRLQ86TD4 932 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 FEZF2Q8TBJ5 459 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 INO80BQ9C086 356 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-211ENST00000641213 LCMT1Q9UIC8 334 aa18.14■□□□□ 0.49
PHGDH-211ENST00000641213 NOVA2Q9UNW9 492 aaKnown RBP18.14■□□□□ 0.49
PHGDH-211ENST00000641213 RRP15Q9Y3B9 282 aaKnown RBP18.14■□□□□ 0.49
PHGDH-211ENST00000641213 LOC102724159A0A0B4J2E5 919 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 TMEM191BP0C7N4 346 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 BRD2P25440 801 aaKnown RBP18.13■□□□□ 0.49
PHGDH-211ENST00000641213 GJA5P36382 358 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 OSTNP61366 133 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 MBTD1Q05BQ5 628 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 PWP2Q15269 919 aaKnown RBP18.13■□□□□ 0.49
PHGDH-211ENST00000641213 CDR2LQ86X02 465 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-211ENST00000641213 CCDC50Q8IVM0 306 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 KATNAL2Q8IYT4 538 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 ATG4AQ8WYN0 398 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 FAM129AQ9BZQ8 928 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 DCLK3Q9C098 648 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 SEMA4AQ9H3S1 761 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 RNPEPQ9H4A4 650 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 MINDY3Q9H8M7 445 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 SPON1Q9HCB6 807 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 ASB14A6NK59 587 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 B4GALT4O60513 344 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 LSM8O95777 96 aaKnown RBP18.13■□□□□ 0.49
PHGDH-211ENST00000641213 RALAP11233 206 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 CCT5P48643 541 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 KLF1Q13351 362 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-211ENST00000641213 ZNF394Q53GI3 561 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 DENND2CQ68D51 928 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 CEP120Q8N960 986 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 SHCBP1Q8NEM2 672 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 ZC3H15Q8WU90 426 aaKnown RBP18.13■□□□□ 0.49
PHGDH-211ENST00000641213 XYLT2Q9H1B5 865 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 EFCC1Q9HA90 598 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 USTQ9Y2C2 406 aa18.13■□□□□ 0.49
PHGDH-211ENST00000641213 DCDC2CA8MYV0 355 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 TP73O15350 636 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 ASAP2O43150 1006 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 C22orf31O95567 290 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 WEE2P0C1S8 567 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 IQCF3P0C7M6 154 aa18.12■□□□□ 0.49
PHGDH-211ENST00000641213 MAN1A1P33908 653 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms