RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 SNW1Q13573 536 aaKnown RBP15.12■□□□□ 0.01
LINC00339-211ENST00000641009 ANGPT1Q15389 498 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 PRSS36Q5K4E3 855 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 SPATA1Q5VX52 437 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 DSTYKQ6XUX3 929 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 SFR1Q86XK3 245 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 FOXQ1Q9C009 403 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 AVENQ9NQS1 362 aaPredicted RBP15.12■□□□□ 0.01
LINC00339-211ENST00000641009 STK17AQ9UEE5 414 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 CCDC39Q9UFE4 941 aa15.12■□□□□ 0.01
LINC00339-211ENST00000641009 AFF4Q9UHB7 1163 aaKnown RBP15.12■□□□□ 0.01
LINC00339-211ENST00000641009 DENND4CQ5VZ89 1909 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 DMXL1Q9Y485 3027 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 ZNF638Q14966 1978 aaKnown RBP15.11■□□□□ 0.01
LINC00339-211ENST00000641009 COL4A2P08572 1712 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 MYMKA6NI61 221 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 PROB1E7EW31 1015 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 OAZ2O95190 189 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 NFICP08651 508 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 ABCD1P33897 745 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 CCR2P41597 374 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 TWF1Q12792 350 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 RRAGBQ5VZM2 374 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 ADALQ6DHV7 355 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 ASCL5Q7RTU5 278 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 FRMD5Q7Z6J6 570 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 HS6ST3Q8IZP7 471 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 PGLYRP2Q96PD5 576 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 USP28Q96RU2 1077 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 ST6GALNAC4Q9H4F1 302 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 GDE1Q9NZC3 331 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 CEP72Q9P209 647 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 MTMR6Q9Y217 621 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 SIT1Q9Y3P8 196 aa15.11■□□□□ 0.01
LINC00339-211ENST00000641009 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.11■□□□□ 0.01
LINC00339-211ENST00000641009 NUP210Q8TEM1 1887 aaPredicted RBP15.11■□□□□ 0.01
LINC00339-211ENST00000641009 VNN2O95498 520 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 TXLNAP40222 546 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 LILRA4P59901 499 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 TMEM132DQ14C87 1099 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 TANGO2Q6ICL3 276 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 ZNF720Q7Z2F6 126 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 USP37Q86T82 979 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 BEST2Q8NFU1 509 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 PJA1Q8NG27 643 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 INTS4Q96HW7 963 aaKnown RBP15.1■□□□□ 0.01
LINC00339-211ENST00000641009 TSPAN18Q96SJ8 248 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 TBC1D7Q9P0N9 293 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 AGO2Q9UKV8 859 aaKnown RBP15.1■□□□□ 0.01
LINC00339-211ENST00000641009 DCHS1Q96JQ0 3298 aa15.1■□□□□ 0.01
LINC00339-211ENST00000641009 KIF26AQ9ULI4 1882 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-211ENST00000641009 F5P12259 2224 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 SPTLC1O15269 473 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 LRRN2O75325 713 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 PPP1R37O75864 691 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 STARD6P59095 220 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 KCNA1Q09470 495 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 MLF2Q15773 248 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-211ENST00000641009 C9orf57Q5W0N0 161 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 OVOS1Q6IE37 1185 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 PDZD4Q76G19 769 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-211ENST00000641009 SV2BQ7L1I2 683 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 CD302Q8IX05 232 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 ELMOD1Q8N336 334 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 DNAJC19Q96DA6 116 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 SENP8Q96LD8 212 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 ZNF512Q96ME7 567 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-211ENST00000641009 PANK2Q9BZ23 570 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 CRISPLD1Q9H336 500 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 MRPL44Q9H9J2 332 aaKnown RBP15.09■□□□□ 0.01
LINC00339-211ENST00000641009 DLGAP2Q9P1A6 1054 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 MAFFQ9ULX9 164 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 YIPF1Q9Y548 306 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 STYXL1Q9Y6J8 313 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 OBSL1O75147 1896 aa15.09■□□□□ 0.01
LINC00339-211ENST00000641009 GVINP1Q7Z2Y8 2422 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 A0A087X0B3 334 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 PRR23AA6NEV1 266 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 K7ELQ4 463 aaPredicted RBP15.08■□□□□ 0.01
LINC00339-211ENST00000641009 ZNF197O14709 1029 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 ECI2O75521 394 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 GLULP15104 373 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 GJA1P17302 382 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 FCARP24071 287 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 ADSSP30520 456 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 SLC44A4Q53GD3 710 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 FAM78AQ5JUQ0 283 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 CYP4A22Q5TCH4 519 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 SLFN12LQ6IEE8 588 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 IQCEQ6IPM2 695 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 CRELD2Q6UXH1 353 aaPredicted RBP15.08■□□□□ 0.01
LINC00339-211ENST00000641009 POMGNT1Q8WZA1 660 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 ELSPBP1Q96BH3 223 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 SHDQ96IW2 340 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 ZSWIM3Q96MP5 696 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 TMEM209Q96SK2 561 aa15.08■□□□□ 0.01
LINC00339-211ENST00000641009 STRA6Q9BX79 667 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms