RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 PIK3CAP42336 1068 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 CDK7P50613 346 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 STK4Q13043 487 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 TTLL12Q14166 644 aaPredicted RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 RCN2Q14257 317 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 GPR162Q16538 588 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 BBS9Q3SYG4 887 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 CIAPIN1Q6FI81 312 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 SNRNP48Q6IEG0 339 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 LRRC8BQ6P9F7 803 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 MARK2Q7KZI7 788 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 LSMEM1Q8N8F7 131 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 DCAF4Q8WV16 495 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 GAB3Q8WWW8 586 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 CHMP6Q96FZ7 201 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 EGLN2Q96KS0 407 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 IER2Q9BTL4 223 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ANO3Q9BYT9 981 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 NUF2Q9BZD4 464 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 VPS16Q9H269 839 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ECT2Q9H8V3 914 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 VTA1Q9NP79 307 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 MYOZ2Q9NPC6 264 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 LRWD1Q9UFC0 647 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 XPO7Q9UIA9 1087 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 EXOC7Q9UPT5 735 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 TMA7Q9Y2S6 64 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 ZNF541Q9H0D2 1346 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ARPC4-TTLL3A0A0A6YYG9 625 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 A0A1W2PQ67 120 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ANKRD34BA5PLL1 514 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ZNF233A6NK53 670 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 TTLL13PA6NNM8 815 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 H0YC42 278 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 MEIS1O00470 390 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 CDK2AP1O14519 115 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ATP9AO75110 1047 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 COL6A2P12110 1019 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 DDX5P17844 614 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 CD9P21926 228 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 SKIV2L2P42285 1042 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 GMPSP49915 693 aaPredicted RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 AP3M2P53677 418 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 TPD52P55327 224 aaPredicted RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 DSTNP60981 165 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 COPS2P61201 443 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 POLR2FP61218 127 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 NIPAL4Q0D2K0 466 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 MTF1Q14872 753 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 PCSK7Q16549 785 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 SPATA1Q5VX52 437 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 LRIG3Q6UXM1 1119 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 PCGF5Q86SE9 256 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
RTTN-223ENST00000640931 IRF2BP1Q8IU81 584 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 PLEKHO2Q8TD55 490 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 RAPGEF5Q92565 580 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ZNF75CPQ92670 426 aaPredicted RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 PEX13Q92968 403 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 ZBED3Q96IU2 234 aaPredicted RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 CDHR1Q96JP9 859 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 PPP1R10Q96QC0 940 aaKnown RBP8.42□□□□□ -1.06
RTTN-223ENST00000640931 AIFM2Q9BRQ8 373 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 CCSER1Q9C0I3 900 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 CNGB3Q9NQW8 809 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 FAM114A2Q9NRY5 505 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 TMOD2Q9NZR1 351 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 SCINQ9Y6U3 715 aa8.42□□□□□ -1.06
RTTN-223ENST00000640931 MYH7BA7E2Y1 1941 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 FAM86B1E9PN63 330 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 PEX11AO75192 247 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 FAM86B2P0C5J1 330 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 CDK4P11802 303 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 KLK7P49862 253 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 NT5C2P49902 561 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 HSD17B4P51659 736 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 ASIC1P78348 528 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 PLS1Q14651 629 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 NR1I3Q14994 352 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 INSCQ1MX18 579 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 ZNF423Q2M1K9 1284 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 PARP6Q2NL67 630 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 GALNTL6Q49A17 601 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 PRR16Q569H4 304 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 ZNF658Q5TYW1 1059 aaPredicted RBP8.41□□□□□ -1.06
RTTN-223ENST00000640931 CDKAL1Q5VV42 579 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 ZNF746Q6NUN9 644 aaPredicted RBP8.41□□□□□ -1.06
RTTN-223ENST00000640931 ASRGL1Q7L266 308 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 VASH1Q7L8A9 365 aaPredicted RBP8.41□□□□□ -1.06
RTTN-223ENST00000640931 PIGWQ7Z7B1 504 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 MICALL2Q8IY33 904 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 GALNT6Q8NCL4 622 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 GMCL1P1Q8NEA9 526 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 SNX29Q8TEQ0 813 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 ZFPM2Q8WW38 1151 aa8.41□□□□□ -1.06
RTTN-223ENST00000640931 ATL1Q8WXF7 558 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms