RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 LDAHQ9H6V9 325 aa7.89□□□□□ -1.15
SCARB2-224ENST00000640880 PIH1D1Q9NWS0 290 aaKnown RBP7.89□□□□□ -1.15
SCARB2-224ENST00000640880 STK32BQ9NY57 414 aa7.89□□□□□ -1.15
SCARB2-224ENST00000640880 RRN3Q9NYV6 651 aa7.89□□□□□ -1.15
SCARB2-224ENST00000640880 PGAP2Q9UHJ9 254 aa7.89□□□□□ -1.15
SCARB2-224ENST00000640880 CTNND2Q9UQB3 1225 aa7.89□□□□□ -1.15
SCARB2-224ENST00000640880 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 PRRT4C9JH25 899 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 COBLO75128 1261 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 AMY1AP04745 511 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 EN2P19622 333 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 PDIA3P30101 505 aaKnown RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 ZNF200P98182 395 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 PPFIA1Q13136 1202 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 FLYWCH1Q4VC44 716 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 PPP1R3BQ86XI6 285 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 UNC5BQ8IZJ1 945 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 BCL6BQ8N143 479 aaPredicted RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 PIK3C3Q8NEB9 887 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 ZNF480Q8WV37 535 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 CYFIP2Q96F07 1278 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 INTS4Q96HW7 963 aaKnown RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 TBATAQ96M53 351 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 PRAM1Q96QH2 718 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 EIF2AK1Q9BQI3 630 aaKnown RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 CARD11Q9BXL7 1154 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 SACM1LQ9NTJ5 587 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 MBNL3Q9NUK0 354 aaKnown RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 AFF4Q9UHB7 1163 aaKnown RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 ANGEL1Q9UNK9 670 aaKnown RBP7.88□□□□□ -1.15
SCARB2-224ENST00000640880 FMN2Q9NZ56 1722 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 ROBO1Q9Y6N7 1651 aa7.88□□□□□ -1.15
SCARB2-224ENST00000640880 H0Y858 1186 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 SKAP2O75563 359 aaPredicted RBP7.87□□□□□ -1.15
SCARB2-224ENST00000640880 THP07101 528 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 GAAP10253 952 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 ALDH9A1P49189 494 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 C19orf54Q5BKX5 351 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 C3orf38Q5JPI3 329 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 DACT2Q5SW24 774 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 NFXL1Q6ZNB6 911 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 PDZD4Q76G19 769 aaPredicted RBP7.87□□□□□ -1.15
SCARB2-224ENST00000640880 ANKRD18AQ8IVF6 992 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 TXLNBQ8N3L3 684 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 MSL3Q8N5Y2 521 aaKnown RBP7.87□□□□□ -1.15
SCARB2-224ENST00000640880 ATP11CQ8NB49 1132 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 ZNF566Q969W8 418 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 ZSWIM3Q96MP5 696 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 P2RX7Q99572 595 aaKnown RBP7.87□□□□□ -1.15
SCARB2-224ENST00000640880 SYT3Q9BQG1 590 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 BRIP1Q9BX63 1249 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 BCO1Q9HAY6 547 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 TLR9Q9NR96 1032 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 KCND1Q9NSA2 647 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 GJB4Q9NTQ9 266 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 ADGRB2O60241 1585 aa7.87□□□□□ -1.15
SCARB2-224ENST00000640880 BLMP54132 1417 aaPredicted RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 PHLPP1O60346 1717 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 KIF1AQ12756 1690 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 CENPJQ9HC77 1338 aaPredicted RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 A0A0G2JNJ9 132 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 OR14I1A6ND48 311 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 NT5C1B-RDH14C9J2C7 533 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 RRP9O43818 475 aaKnown RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 RNASE1P07998 156 aaKnown RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 FTH1P19P0C7X4 201 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 DDCP20711 480 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 EEF1GP26641 437 aaKnown RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 MAN1A1P33908 653 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 SREBF1P36956 1147 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 GEMIN4P57678 1058 aaKnown RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 CACNB2Q08289 660 aaPredicted RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 GRM1Q13255 1194 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 TMEM200BQ69YZ2 307 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 CACNA2D3Q8IZS8 1091 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 PPHLN1Q8NEY8 458 aaKnown RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 OR7D4Q8NG98 312 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 CPA5Q8WXQ8 436 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 NKD2Q969F2 451 aaPredicted RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 UIMC1Q96RL1 719 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 SENP6Q9GZR1 1112 aaPredicted RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 LANCL2Q9NS86 450 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 COL20A1Q9P218 1284 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 GRHPRQ9UBQ7 328 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 Q9UFV3 132 aa7.86□□□□□ -1.15
SCARB2-224ENST00000640880 LRRFIP2Q9Y608 721 aaKnown RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 RGPD8O14715 1765 aaPredicted RBP7.86□□□□□ -1.15
SCARB2-224ENST00000640880 PARD3Q8TEW0 1356 aa7.85□□□□□ -1.15
SCARB2-224ENST00000640880 VIRMAQ69YN4 1812 aaKnown RBP7.85□□□□□ -1.15
SCARB2-224ENST00000640880 PLA2G6O60733 806 aa7.85□□□□□ -1.15
SCARB2-224ENST00000640880 GPR32O75388 356 aa7.85□□□□□ -1.15
SCARB2-224ENST00000640880 AHSGP02765 367 aa7.85□□□□□ -1.15
SCARB2-224ENST00000640880 CYP2C8P10632 490 aa7.85□□□□□ -1.15
SCARB2-224ENST00000640880 FGFR2P21802 821 aa7.85□□□□□ -1.15
SCARB2-224ENST00000640880 PRDX5P30044 214 aa7.85□□□□□ -1.15
SCARB2-224ENST00000640880 RPS16P62249 146 aaKnown RBP7.85□□□□□ -1.15
SCARB2-224ENST00000640880 HTRA4P83105 476 aaPredicted RBP7.85□□□□□ -1.15
SCARB2-224ENST00000640880 GALNT1Q10472 559 aaPredicted RBP7.85□□□□□ -1.15
SCARB2-224ENST00000640880 TAS1R1Q7RTX1 841 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms