RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 FDX1P10109 184 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 NQO1P15559 274 aaKnown RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 SLC8A1P32418 973 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 ELF1P32519 619 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 OSTNP61366 133 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 PTK6Q13882 451 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 SNRNP48Q6IEG0 339 aaKnown RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 MCEEQ96PE7 176 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 TMEM121Q9BTD3 319 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 PPP1R1BQ9UD71 204 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-221ENST00000640341 NEU2Q9Y3R4 380 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 CEP83Q9Y592 693 aa15.48■□□□□ 0.07
SCARB2-221ENST00000640341 F8VP50 259 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 KCNT1Q5JUK3 1230 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 CYP4A22Q5TCH4 519 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 C12orf50Q8NA57 414 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-221ENST00000640341 RBBP8NLQ8NC74 664 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-221ENST00000640341 ATP6V0A1Q93050 837 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 MFSD14AQ96MC6 490 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 C12orf65Q9H3J6 166 aaKnown RBP15.47■□□□□ 0.07
SCARB2-221ENST00000640341 YY1AP1Q9H869 796 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 SLC38A10Q9HBR0 1119 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 APOBEC3GQ9HC16 384 aaKnown RBP15.47■□□□□ 0.07
SCARB2-221ENST00000640341 ARL2BPQ9Y2Y0 163 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 COQ4Q9Y3A0 265 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 CA4P22748 312 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 COPS2P61201 443 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 MAMLD1Q13495 774 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 TXNRD3NBQ6F5E7 133 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 RHBDF2Q6PJF5 856 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 MFSD7Q6UXD7 560 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 OR5B17Q8NGF7 314 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 DEPTORQ8TB45 409 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 NSMCE1Q8WV22 266 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 XPNPEP1Q9NQW7 623 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 FBXO40Q9UH90 709 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 IVNS1ABPQ9Y6Y0 642 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 SLX4Q8IY92 1834 aa15.47■□□□□ 0.07
SCARB2-221ENST00000640341 FOXN2P32314 431 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 CETN2P41208 172 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 RNASELQ05823 741 aaKnown RBP15.46■□□□□ 0.07
SCARB2-221ENST00000640341 NFX1Q12986 1120 aaKnown RBP15.46■□□□□ 0.07
SCARB2-221ENST00000640341 CDR2LQ86X02 465 aaPredicted RBP15.46■□□□□ 0.07
SCARB2-221ENST00000640341 MAIP1Q8WWC4 291 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 CKAP2Q8WWK9 683 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 MSTO1Q9BUK6 570 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 TMEM109Q9BVC6 243 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 ZWILCHQ9H900 591 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 K7ERI5 159 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 PECAM1P16284 738 aaPredicted RBP15.46■□□□□ 0.07
SCARB2-221ENST00000640341 SFNP31947 248 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 GCNT1Q02742 428 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 ORC1Q13415 861 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 PKN2Q16513 984 aaKnown RBP15.46■□□□□ 0.07
SCARB2-221ENST00000640341 EEPD1Q7L9B9 569 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 TMC2Q8TDI7 906 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 ERP27Q96DN0 273 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 ANKEF1Q9NU02 776 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 GEMIN8Q9NWZ8 242 aaKnown RBP15.46■□□□□ 0.07
SCARB2-221ENST00000640341 KIF13BQ9NQT8 1826 aa15.46■□□□□ 0.07
SCARB2-221ENST00000640341 WDR46O15213 610 aaKnown RBP15.46■□□□□ 0.06
SCARB2-221ENST00000640341 DIAPH2O60879 1101 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 ANP32DO95626 131 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 TARSP26639 723 aaKnown RBP15.46■□□□□ 0.06
SCARB2-221ENST00000640341 TAS1R3Q7RTX0 852 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 SUPT20HQ8NEM7 779 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 CYP26B1Q9NR63 512 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 AGTPBP1Q9UPW5 1226 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 NUB1Q9Y5A7 615 aa15.46■□□□□ 0.06
SCARB2-221ENST00000640341 BRD2P25440 801 aaKnown RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 GTF2H1P32780 548 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 GSCP56915 257 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 IL9RQ01113 521 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 CUL2Q13617 745 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 SEPT7Q16181 437 aaKnown RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 JPH1Q9HDC5 661 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 MCM8Q9UJA3 840 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 LRRC37AA6NMS7 1700 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 SKAP2O75563 359 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 WEE2P0C1S8 567 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 NEFHP12036 1026 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 MAN1A1P33908 653 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 SLC1A1P43005 524 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 GAD2Q05329 585 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 PDIA2Q13087 525 aaKnown RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 TMEM132AQ24JP5 1023 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 C7orf43Q8WVR3 580 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 MRPL47Q9HD33 250 aaKnown RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 ACTR2P61160 394 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 MON1BQ7L1V2 547 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 ANKRD35Q8N283 1001 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 ZNF526Q8TF50 670 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-221ENST00000640341 ST6GALNAC4Q9H4F1 302 aa15.45■□□□□ 0.06
SCARB2-221ENST00000640341 NRXN2Q9P2S2 1712 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 ZNF541Q9H0D2 1346 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 FAM47DPA6NHR8 397 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 DGAT1O75907 488 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 LYPLA2O95372 231 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 CD19P15391 556 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms