RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 HERC2P3Q9BVR0 1158 aa20.9■□□□□ 0.94
HLA-A-209ENST00000638375 LZTS1Q9Y250 596 aa20.9■□□□□ 0.94
HLA-A-209ENST00000638375 COQ4Q9Y3A0 265 aa20.9■□□□□ 0.94
HLA-A-209ENST00000638375 CHD7Q9P2D1 2997 aa20.9■□□□□ 0.94
HLA-A-209ENST00000638375 PLXNA4Q9HCM2 1894 aa20.9■□□□□ 0.94
HLA-A-209ENST00000638375 PMM2O15305 246 aa20.89■□□□□ 0.93
HLA-A-209ENST00000638375 N4BP1O75113 896 aaKnown RBP20.89■□□□□ 0.93
HLA-A-209ENST00000638375 SOD2P04179 222 aa20.89■□□□□ 0.93
HLA-A-209ENST00000638375 FXR1P51114 621 aaKnown RBP eCLIP20.89■□□□□ 0.93
HLA-A-209ENST00000638375 UBE3AQ05086 875 aa20.89■□□□□ 0.93
HLA-A-209ENST00000638375 SV2CQ496J9 727 aa20.89■□□□□ 0.93
HLA-A-209ENST00000638375 APTXQ7Z2E3 356 aaKnown RBP20.89■□□□□ 0.93
HLA-A-209ENST00000638375 RNF214Q8ND24 703 aa20.89■□□□□ 0.93
HLA-A-209ENST00000638375 FBXL13Q8NEE6 735 aa20.89■□□□□ 0.93
HLA-A-209ENST00000638375 B3GALT6Q96L58 329 aa20.89■□□□□ 0.93
HLA-A-209ENST00000638375 LIMA1Q9UHB6 759 aaKnown RBP20.89■□□□□ 0.93
HLA-A-209ENST00000638375 R3HCC1Q9Y3T6 440 aaKnown RBP20.89■□□□□ 0.93
HLA-A-209ENST00000638375 COL4A4P53420 1690 aaPredicted RBP20.89■□□□□ 0.93
HLA-A-209ENST00000638375 KPNA7A9QM74 516 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 M0QZQ0 153 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 STAU1O95793 577 aaKnown RBP20.88■□□□□ 0.93
HLA-A-209ENST00000638375 CDK11BP21127 795 aaKnown RBP20.88■□□□□ 0.93
HLA-A-209ENST00000638375 TKTP29401 623 aaKnown RBP20.88■□□□□ 0.93
HLA-A-209ENST00000638375 ATICP31939 592 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 ELAVL2Q12926 359 aaKnown RBP20.88■□□□□ 0.93
HLA-A-209ENST00000638375 MYO1EQ12965 1108 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 VWA3BQ502W6 1294 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 FAM171A1Q5VUB5 890 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 GPR153Q6NV75 609 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 GAS2L3Q86XJ1 694 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 VPS52Q8N1B4 723 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 SENP8Q96LD8 212 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 PI4K2AQ9BTU6 479 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 ZBP1Q9H171 429 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 PRDM12Q9H4Q4 367 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 VRTNQ9H8Y1 702 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 RAB20Q9NX57 234 aa20.88■□□□□ 0.93
HLA-A-209ENST00000638375 PUF60Q9UHX1 559 aaKnown RBP20.88■□□□□ 0.93
HLA-A-209ENST00000638375 P4HA2O15460 535 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 TRAPPC3O43617 180 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 CSPG5O95196 566 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 ASS1P00966 412 aaKnown RBP20.87■□□□□ 0.93
HLA-A-209ENST00000638375 FGFR3P22607 806 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 PAX3P23760 479 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 COPB1P53618 953 aaKnown RBP20.87■□□□□ 0.93
HLA-A-209ENST00000638375 ERVFC1P60507 584 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 ZNF699Q32M78 642 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 RTP2Q5QGT7 225 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 SPOPLQ6IQ16 392 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 DSTYKQ6XUX3 929 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 VPS16Q9H269 839 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 NDST4Q9H3R1 872 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 APOBEC3GQ9HC16 384 aaKnown RBP20.87■□□□□ 0.93
HLA-A-209ENST00000638375 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.87■□□□□ 0.93
HLA-A-209ENST00000638375 CHST7Q9NS84 486 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 GDAP2Q9NXN4 497 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 PCDHB8Q9UN66 801 aa20.87■□□□□ 0.93
HLA-A-209ENST00000638375 LRRC10BA6NIK2 292 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 GOLGA6L19H0YKK7 550 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 FSCN2O14926 492 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 IRS1P35568 1242 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 SGSM1Q2NKQ1 1148 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 USP41Q3LFD5 358 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.86■□□□□ 0.93
HLA-A-209ENST00000638375 Q7L0L9 218 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 ANKRD20A12PQ8NF67 263 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 LMO3Q8TAP4 145 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 AUTS2Q8WXX7 1259 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 LMAN2LQ9H0V9 348 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 TLR9Q9NR96 1032 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 STK39Q9UEW8 545 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 POLIQ9UNA4 740 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 PCDHGC5Q9Y5F6 944 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 TIMM13Q9Y5L4 95 aaPredicted RBP20.86■□□□□ 0.93
HLA-A-209ENST00000638375 SNX9Q9Y5X1 595 aa20.86■□□□□ 0.93
HLA-A-209ENST00000638375 CYB561D2O14569 222 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 SYN3O14994 580 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 CTSAP10619 480 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 NOP14P78316 857 aaKnown RBP20.85■□□□□ 0.93
HLA-A-209ENST00000638375 DSG1Q02413 1049 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 WDR72Q3MJ13 1102 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 LIMS2Q7Z4I7 341 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 CEP57Q86XR8 500 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 TAF4BQ92750 862 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 TCF25Q9BQ70 676 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 TTPALQ9BTX7 342 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 L1RE1Q9UN81 338 aa20.85■□□□□ 0.93
HLA-A-209ENST00000638375 VWA8A3KMH1 1905 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 URODP06132 367 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 ODC1P11926 461 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 TYMPP19971 482 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 GLUD2P49448 558 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 TPM4P67936 248 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 ADGRE1Q14246 886 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 PTPN14Q15678 1187 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 ZNF667Q5HYK9 610 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 KIAA0319Q5VV43 1072 aa20.84■□□□□ 0.93
HLA-A-209ENST00000638375 PRSS55Q6UWB4 352 aaPredicted RBP20.84■□□□□ 0.93
HLA-A-209ENST00000638375 EHBP1Q8NDI1 1231 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms