RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 KMT2EQ8IZD2 1858 aa20.55■□□□□ 0.88
CLN6-221ENST00000637494 OR6C75A6NL08 312 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 ZNF197O14709 1029 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 OAZ2O95190 189 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 RHOP08100 348 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 NFICP08651 508 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 ZSCAN22P10073 491 aaPredicted RBP20.54■□□□□ 0.88
CLN6-221ENST00000637494 AARSP49588 968 aaKnown RBP eCLIP20.54■□□□□ 0.88
CLN6-221ENST00000637494 GUCY2FP51841 1108 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 ARMCX5Q6P1M9 558 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 NT5DC4Q86YG4 428 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 ITFG1Q8TB96 612 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 ZNF512Q96ME7 567 aaPredicted RBP20.54■□□□□ 0.88
CLN6-221ENST00000637494 RTP3Q9BQQ7 232 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 TNMDQ9H2S6 317 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 TMEM206Q9H813 350 aa20.54■□□□□ 0.88
CLN6-221ENST00000637494 TIMM13Q9Y5L4 95 aaPredicted RBP20.54■□□□□ 0.88
CLN6-221ENST00000637494 TISP43B9A030 160 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 GALR2O43603 387 aaPredicted RBP20.53■□□□□ 0.88
CLN6-221ENST00000637494 PPP1R37O75864 691 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 TYMPP19971 482 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 LILRA4P59901 499 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 CYP4A22Q5TCH4 519 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 C9orf57Q5W0N0 161 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 ATL3Q6DD88 541 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 OVOS1Q6IE37 1185 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 ALYREFQ86V81 257 aaKnown RBP20.53■□□□□ 0.88
CLN6-221ENST00000637494 METTL23Q86XA0 190 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 IQUBQ8NA54 791 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 KCNG4Q8TDN1 519 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 CORO1BQ9BR76 489 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 AVENQ9NQS1 362 aaPredicted RBP20.53■□□□□ 0.88
CLN6-221ENST00000637494 DPP3Q9NY33 737 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 GDE1Q9NZC3 331 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 DSEQ9UL01 958 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 CA14Q9ULX7 337 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 TRIOO75962 3097 aa20.53■□□□□ 0.88
CLN6-221ENST00000637494 ZNF318Q5VUA4 2279 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 A0A087X0B3 334 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 SEC24AO95486 1093 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 F13A1P00488 732 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 AOC1P19801 751 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 GARTP22102 1010 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 PLD1Q13393 1074 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 FOXD4L6Q3SYB3 417 aaPredicted RBP20.52■□□□□ 0.88
CLN6-221ENST00000637494 PARM1Q6UWI2 310 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 FOXD4L3Q6VB84 417 aaPredicted RBP20.52■□□□□ 0.88
CLN6-221ENST00000637494 RNF19BQ6ZMZ0 732 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 PDZD4Q76G19 769 aaPredicted RBP20.52■□□□□ 0.88
CLN6-221ENST00000637494 NPAS3Q8IXF0 933 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 TMEM105Q8N8V8 129 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 NOC3LQ8WTT2 800 aaKnown RBP20.52■□□□□ 0.88
CLN6-221ENST00000637494 ING5Q8WYH8 240 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 DHX58Q96C10 678 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 SENP8Q96LD8 212 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 FAM213AQ9BRX8 229 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 CFAP45Q9UL16 551 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 MYH15Q9Y2K3 1946 aa20.52■□□□□ 0.88
CLN6-221ENST00000637494 FRMD3A2A2Y4 597 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 ME1P48163 572 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 TAF6P49848 677 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 TWF1Q12792 350 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 TCF15Q12870 199 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 MYBPC2Q14324 1141 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 LEMD2Q8NC56 503 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 GPR152Q8TDT2 470 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 CACTINQ8WUQ7 758 aaKnown RBP20.51■□□□□ 0.87
CLN6-221ENST00000637494 ATOH1Q92858 354 aaPredicted RBP20.51■□□□□ 0.87
CLN6-221ENST00000637494 FGF14Q92915 247 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 MCRS1Q96EZ8 462 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 ZNF560Q96MR9 790 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 SLC2A4RGQ9NR83 387 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 FAM13BQ9NYF5 915 aa20.51■□□□□ 0.87
CLN6-221ENST00000637494 ANO9A1A5B4 782 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 PIRO00625 290 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 PPEF2O14830 753 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 KIAA0391O15091 583 aaKnown RBP20.5■□□□□ 0.87
CLN6-221ENST00000637494 ADSSP30520 456 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 PNPLA4P41247 253 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 ALDH1A3P47895 512 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 MRE11P49959 708 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 ASIC1P78348 528 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 PFKPQ01813 784 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 KCNA1Q09470 495 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 GPR17Q13304 367 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 SV2CQ496J9 727 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 THEM5Q8N1Q8 247 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 TMEM130Q8N3G9 435 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 SHDQ96IW2 340 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 PYM1Q9BRP8 204 aaKnown RBP20.5■□□□□ 0.87
CLN6-221ENST00000637494 MAGEF1Q9HAY2 307 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 ASAH2Q9NR71 780 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 ARHGEF3Q9NR81 526 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 RBAKQ9NYW8 714 aaPredicted RBP20.5■□□□□ 0.87
CLN6-221ENST00000637494 R3HCC1Q9Y3T6 440 aaKnown RBP20.5■□□□□ 0.87
CLN6-221ENST00000637494 GTF3C3Q9Y5Q9 886 aa20.5■□□□□ 0.87
CLN6-221ENST00000637494 MICAL2O94851 1124 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 CASP5P51878 434 aa20.49■□□□□ 0.87
CLN6-221ENST00000637494 EPHB3P54753 998 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms