RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CCDC34Q96HJ3 373 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 KCNG1Q9UIX4 513 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 R4GN57 208 aa13.74□□□□□ -0.21
CTSD-208ENST00000636843 ECI2O75521 394 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 ABLIM3O94929 683 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 LRG1P02750 347 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 GLULP15104 373 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 PTPN2P17706 415 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 PROZP22891 400 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 CDC25BP30305 580 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 MAGEA9P43362 315 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 OSTNP61366 133 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
CTSD-208ENST00000636843 RINT1Q6NUQ1 792 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 ZMAT2Q96NC0 199 aaKnown RBP13.73□□□□□ -0.21
CTSD-208ENST00000636843 TCHPQ9BT92 498 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 RUSC1Q9BVN2 902 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 TARS2Q9BW92 718 aaKnown RBP13.73□□□□□ -0.21
CTSD-208ENST00000636843 TRIM5Q9C035 493 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
CTSD-208ENST00000636843 CNTN3Q9P232 1028 aa13.73□□□□□ -0.21
CTSD-208ENST00000636843 ABLIM1O14639 778 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 TBC1D4O60343 1298 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 ATF2P15336 505 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 GUCY2CP25092 1073 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 ZNF75DP51815 510 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 MAPK7Q13164 816 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 MRPL58Q14197 206 aaKnown RBP13.72□□□□□ -0.21
CTSD-208ENST00000636843 ZNF528Q3MIS6 628 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 DTHD1Q6ZMT9 781 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
CTSD-208ENST00000636843 TCEAL8Q8IYN2 117 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 KCTD17Q8N5Z5 321 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 ING5Q8WYH8 240 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 NELL2Q99435 816 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 NTPCRQ9BSD7 190 aaKnown RBP13.72□□□□□ -0.21
CTSD-208ENST00000636843 NUB1Q9Y5A7 615 aa13.72□□□□□ -0.21
CTSD-208ENST00000636843 CACNA1IQ9P0X4 2223 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 WDR27A2RRH5 827 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 FAM170BA6NMN3 283 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 PP2D1A8MPX8 630 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 SMTNL1A8MU46 457 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 PRRG1O14668 218 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 ZNF197O14709 1029 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 SLC16A4O15374 487 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 LAMTOR5O43504 91 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 LRRN2O75325 713 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 MICAL2O94851 1124 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 SMTNP53814 917 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 TPM4P67936 248 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 ATP2C1P98194 919 aaPredicted RBP13.71□□□□□ -0.21
CTSD-208ENST00000636843 STRN3Q13033 797 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 UBXN2BQ14CS0 331 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 SLC5A9Q2M3M2 681 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 MCRS1Q96EZ8 462 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 SUSD3Q96L08 255 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
CTSD-208ENST00000636843 LTB4R2Q9NPC1 389 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 FBXO4Q9UKT5 387 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
CTSD-208ENST00000636843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.71□□□□□ -0.213e-10■□□□□ 9.8
CTSD-208ENST00000636843 NCAM2O15394 837 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 TOM1L1O75674 476 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 CDC25AP30304 524 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 ARPP19P56211 112 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.221e-8■□□□□ 8.1
CTSD-208ENST00000636843 IL17AQ16552 155 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 HYIQ5T013 277 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 KCNK18Q7Z418 384 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 MAML2Q8IZL2 1156 aaPredicted RBP13.7□□□□□ -0.22
CTSD-208ENST00000636843 APPL2Q8NEU8 664 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 ERCC4Q92889 916 aaPredicted RBP13.7□□□□□ -0.22
CTSD-208ENST00000636843 C18orf25Q96B23 403 aaPredicted RBP13.7□□□□□ -0.22
CTSD-208ENST00000636843 ELSPBP1Q96BH3 223 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 MMTAG2Q9BU76 263 aaKnown RBP13.7□□□□□ -0.22
CTSD-208ENST00000636843 CYP4F11Q9HBI6 524 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 SPATA6Q9NWH7 488 aaPredicted RBP13.7□□□□□ -0.22
CTSD-208ENST00000636843 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
CTSD-208ENST00000636843 NOTCH4Q99466 2003 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 TRIP11Q15643 1979 aa13.7□□□□□ -0.22
CTSD-208ENST00000636843 SFI1A8K8P3 1242 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 IKBKBO14920 756 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 HARSP12081 509 aaKnown RBP13.69□□□□□ -0.22
CTSD-208ENST00000636843 PLS3P13797 630 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 CEBPBP17676 345 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 GRIN1Q05586 938 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 DPCR1Q3MIW9 517 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 CTXN3Q4LDR2 81 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 PRSS36Q5K4E3 855 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 ARL6IP4Q66PJ3 421 aaKnown RBP13.69□□□□□ -0.22
CTSD-208ENST00000636843 TANGO2Q6ICL3 276 aa13.69□□□□□ -0.22
CTSD-208ENST00000636843 ZNF280DQ6N043 979 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms