RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 CCNE1P24864 410 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 GSSP48637 474 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ENTPD1P49961 510 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 KLHL30Q0D2K2 578 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ATP1A4Q13733 1029 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 RAPGEF1Q13905 1077 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 GRM2Q14416 872 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ACAP1Q15027 740 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ZNF174Q15697 407 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 GRAMD1BQ3KR37 738 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 FAM209AQ5JX71 171 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 EPM2AIP1Q7L775 607 aaPredicted RBP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ADAT2Q7Z6V5 191 aaKnown RBP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 CLNKQ7Z7G1 428 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ERI1Q8IV48 349 aaKnown RBP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 RIOK1Q9BRS2 568 aaKnown RBP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 MRPS26Q9BYN8 205 aaKnown RBP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 TRIM55Q9BYV6 548 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 NAPBQ9H115 298 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ARMC7Q9H6L4 198 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 CLK4Q9HAZ1 481 aaKnown RBP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 DNAJB4Q9UDY4 337 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 BRWD3Q6RI45 1802 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 PFDN6O15212 129 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 DGKIO75912 1065 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 TFPTP0C1Z6 253 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 AMPD1P23109 780 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 DHX34Q14147 1143 aaKnown RBP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 E2F2Q14209 437 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 SLC18A3Q16572 532 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 TMEM67Q5HYA8 995 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 DUPD1Q68J44 220 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 TTI2Q6NXR4 508 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 PDZD8Q8NEN9 1154 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 TRPC4APQ8TEL6 797 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 OLFML3Q9NRN5 406 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 MKS1Q9NXB0 559 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCN1A-213ENST00000636759 TBK1Q9UHD2 729 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ZNHIT2Q9UHR6 403 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 ZNF652Q9Y2D9 606 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 LRRC37AA6NMS7 1700 aa7.21□□□□□ -1.26
SCN1A-213ENST00000636759 FAM47DPA6NHR8 397 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 TMEM114B3SHH9 223 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SNAP23O00161 211 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 FKBP6O75344 327 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 USP1O94782 785 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PABPC1P11940 636 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SLC5A1P13866 664 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 HMOX2P30519 316 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 KLRC3Q07444 240 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SLC35G1Q2M3R5 365 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 ERFEQ4G0M1 354 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 JAMLQ86YT9 394 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 KSR1Q8IVT5 923 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 BORCS5Q969J3 196 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 MTBPQ96DY7 904 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 CCDC138Q96M89 665 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 EDEM3Q9BZQ6 932 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 RSL24D1Q9UHA3 163 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 DCTN4Q9UJW0 460 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 BHMG1C9JSJ3 638 aaPredicted RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 C2CD2LO14523 706 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 RPS6KA4O75676 772 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 BAIAP3O94812 1187 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 FBXO21O94952 628 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 DEXIO95424 95 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 CHEK2O96017 543 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 TFAP2AP05549 437 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PCSK6P29122 969 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 GNA11P29992 359 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SLC5A2P31639 672 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PPP1R2P41236 205 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 NR1H2P55055 460 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 VCPP55072 806 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 C21orf59P57076 290 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 XIAPP98170 497 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 CHRNDQ07001 517 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 EIF2B5Q13144 721 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 HNRNPDQ14103 355 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 TRMT10CQ7L0Y3 403 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 TRIML2Q8N7C3 387 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 SPERTQ8NA61 448 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 GOLM1Q8NBJ4 401 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 GLG1Q92896 1179 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 EFHD2Q96C19 240 aaPredicted RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 EHD1Q9H4M9 534 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 NPHS2Q9NP85 383 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 ZDHHC18Q9NUE0 388 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 C6orf203Q9P0P8 240 aaPredicted RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 NARFQ9UHQ1 456 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 RABGEF1Q9UJ41 708 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 AMFRQ9UKV5 643 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 CNTNAP5Q8WYK1 1306 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 EPHB6O15197 1021 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 TNFAIP8O95379 198 aa7.2□□□□□ -1.26
SCN1A-213ENST00000636759 PARNO95453 639 aaKnown RBP7.2□□□□□ -1.26
SCN1A-213ENST00000636759 LDHBP07195 334 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms