RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 RHBDF2Q6PJF5 856 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 C12orf56Q8IXR9 622 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 ZBED8Q8IZ13 594 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 IFT74Q96LB3 600 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 MFSD14AQ96MC6 490 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 TRAIPQ9BWF2 469 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 RBAKQ9NYW8 714 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 LRRD1A4D1F6 860 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 PIK3R2O00459 728 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 RGS20O76081 388 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 VNN1O95497 513 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 KRT1P04264 644 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 EDN1P05305 212 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 MAGEA4P43358 317 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 PKN2Q16513 984 aaKnown RBP14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 CGB2Q6NT52 195 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 RBBP8NLQ8NC74 664 aaPredicted RBP14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 ZBTB10Q96DT7 871 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 PITPNM3Q9BZ71 974 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 ZWILCHQ9H900 591 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 SLC12A4Q9UP95 1085 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 QSER1Q2KHR3 1735 aa14.88□□□□□ -0.03
CACNA1A-228ENST00000636610 KAT6AQ92794 2004 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 DNAJC8O75937 253 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 PROSCO94903 275 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 TNFSF9P41273 254 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 CXCL9Q07325 125 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 NAA25Q14CX7 972 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 EFTUD2Q15029 972 aaKnown RBP eCLIP14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 TMEM63BQ5T3F8 832 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 DCUN1D2Q6PH85 259 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 LRRN4Q8WUT4 740 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 TJP2Q9UDY2 1190 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 COQ4Q9Y3A0 265 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 A0A1W2PPM1 405 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 MGRN1O60291 552 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 UPP2O95045 317 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 PECAM1P16284 738 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 JAK3P52333 1124 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 KRT76Q01546 638 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 NEDD9Q14511 834 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 SPDYCQ5MJ68 293 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 SERPINB12Q96P63 405 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 MSTO1Q9BUK6 570 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 CYP26B1Q9NR63 512 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 NEU2Q9Y3R4 380 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 SGK1O00141 431 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 ZBED4O75132 1171 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 MARK3P27448 753 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 GBP1P32455 592 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 GTF2H1P32780 548 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 ERFP50548 548 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 WDR4P57081 412 aaKnown RBP14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 ACTR2P61160 394 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 SP2Q02086 613 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 PTK6Q13882 451 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 ITIH4Q14624 930 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 PREPLQ4J6C6 727 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 NBPF12Q5TAG4 269 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 MON1BQ7L1V2 547 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 RHOT1Q8IXI2 618 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 ASAP3Q8TDY4 903 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 MORC4Q8TE76 937 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 PPP1R16BQ96T49 567 aa14.87□□□□□ -0.03
CACNA1A-228ENST00000636610 K7ERI5 159 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 NQO1P15559 274 aaKnown RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 TARSP26639 723 aaKnown RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 CLNS1AP54105 237 aaKnown RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 NFX1Q12986 1120 aaKnown RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 STRN3Q13033 797 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 LIN9Q5TKA1 542 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 MFSD5Q6N075 450 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 C12orf50Q8NA57 414 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 SUPT20HQ8NEM7 779 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 NSMCE1Q8WV22 266 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 GMLQ99445 158 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 ETNK1Q9HBU6 452 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 JPH1Q9HDC5 661 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 CEP350Q5VT06 3117 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 VWA5AO00534 786 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 MAP3K6O95382 1288 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 OVGP1Q12889 678 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 CUL2Q13617 745 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 DLK2Q6UY11 383 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 USP37Q86T82 979 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 CKAP2Q8WWK9 683 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 ROPN1BQ9BZX4 212 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 ROPN1Q9HAT0 212 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 KLHL14Q9P2G3 628 aa14.86□□□□□ -0.03
CACNA1A-228ENST00000636610 WDR46O15213 610 aaKnown RBP14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 DIAPH2O60879 1101 aa14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 CSDE1O75534 798 aaKnown RBP14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 CA4P22748 312 aa14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 RPA3P35244 121 aaPredicted RBP14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 NOMO3P69849 1222 aa14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 GCNT1Q02742 428 aa14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 VSIG1Q86XK7 387 aa14.85□□□□□ -0.03
CACNA1A-228ENST00000636610 ECHDC2Q86YB7 292 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms