RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 ZNF461Q8TAF7 563 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 SMARCD2Q92925 531 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 B3GALT6Q96L58 329 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 ASB16Q96NS5 453 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 MMTAG2Q9BU76 263 aaKnown RBP8.09□□□□□ -1.11
CIITA-214ENST00000636238 APOL6Q9BWW8 343 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 C2orf40Q9H1Z8 148 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 TTC12Q9H892 705 aaPredicted RBP8.09□□□□□ -1.11
CIITA-214ENST00000636238 LMAN1LQ9HAT1 526 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 ZNF334Q9HCZ1 680 aaPredicted RBP8.09□□□□□ -1.11
CIITA-214ENST00000636238 HEBP1Q9NRV9 189 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 LRWD1Q9UFC0 647 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 HES2Q9Y543 173 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 DOCK8Q8NF50 2099 aa8.09□□□□□ -1.11
CIITA-214ENST00000636238 EVPLQ92817 2033 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 EML1O00423 815 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 SYN3O14994 580 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ABLIM3O94929 683 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 KIF4AO95239 1232 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CCDC192P0DO97 292 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CHRNB1P11230 501 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ATF2P15336 505 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ELF1P32519 619 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 OR1D2P34982 312 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 TXLNAP40222 546 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 STAT6P42226 847 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 EPHA5P54756 1037 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CAPSQ13938 189 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ACAP1Q15027 740 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 NAB2Q15742 525 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 E2F4Q16254 413 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 DCAF4L1Q3SXM0 396 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ANO6Q4KMQ2 910 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 PRSS36Q5K4E3 855 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CYP4A22Q5TCH4 519 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 RRAGBQ5VZM2 374 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CDCA2Q69YH5 1023 aaPredicted RBP8.08□□□□□ -1.12
CIITA-214ENST00000636238 NCAPH2Q6IBW4 605 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 TANGO2Q6ICL3 276 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 PRR23BQ6ZRT6 265 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CEP57Q86XR8 500 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 GLYCTKQ8IVS8 523 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 MFSD6LQ8IWD5 586 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CEP57L1Q8IYX8 460 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ELMOD1Q8N336 334 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 IGSF22Q8N9C0 903 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
CIITA-214ENST00000636238 MCPH1Q8NEM0 835 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 LRRC15Q8TF66 581 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 DDX27Q96GQ7 796 aaKnown RBP8.08□□□□□ -1.12
CIITA-214ENST00000636238 PAGE5Q96GU1 130 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 AK8Q96MA6 479 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 PNMA5Q96PV4 448 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 SH2D3AQ9BRG2 576 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ADPGKQ9BRR6 497 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 OXCT2Q9BYC2 517 aaPredicted RBP8.08□□□□□ -1.12
CIITA-214ENST00000636238 CCSER1Q9C0I3 900 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 FZD8Q9H461 694 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 GRPEL1Q9HAV7 217 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 XPNPEP1Q9NQW7 623 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 KIAA1468Q9P260 1216 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 PARP2Q9UGN5 583 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 PCDHA12Q9UN75 941 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 PIAS3Q9Y6X2 628 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 ZFYVE26Q68DK2 2539 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 C2orf16Q68DN1 1984 aa8.08□□□□□ -1.12
CIITA-214ENST00000636238 CNOT1A5YKK6 2376 aaKnown RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 F5P12259 2224 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 PHLPP2Q6ZVD8 1323 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 WDR27A2RRH5 827 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 H7C4K7 107 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 K7ESF4 209 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 ARNTLO00327 626 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 PTGESO14684 152 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 ZNF263O14978 683 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 CHADO15335 359 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 HRO43593 1189 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 EPN2O95208 641 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 NPTXRO95502 500 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 SLFN14P0C7P3 912 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 MYBP10242 640 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 PLCG1P19174 1290 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 GLRA2P23416 452 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 AKAP5P24588 427 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 WEE1P30291 646 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 PDIA5Q14554 519 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 DHX8Q14562 1220 aaKnown RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 POSTNQ15063 836 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 ECM1Q16610 540 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 AASDHQ4L235 1098 aaPredicted RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 FAM78AQ5JUQ0 283 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 N4BP2L1Q5TBK1 243 aaPredicted RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 IQCEQ6IPM2 695 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 C11orf57Q6ZUT1 292 aaPredicted RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 PDZD4Q76G19 769 aaPredicted RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 CEP68Q76N32 757 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 CACNA2D4Q7Z3S7 1137 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 RALGPS2Q86X27 583 aaPredicted RBP8.07□□□□□ -1.12
CIITA-214ENST00000636238 ZBTB8OSQ8IWT0 167 aa8.07□□□□□ -1.12
CIITA-214ENST00000636238 IQUBQ8NA54 791 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms