RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	SKIL	P12757	684 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	P4HA1	P13674	534 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FER	P16591	822 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	RPL9	P32969	192 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PRKCI	P41743	596 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TAF6	P49848	677 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FPGS	Q05932	587 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	DSC1	Q08554	894 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PPIG	Q13427	754 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ASIC2	Q16515	512 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	UPP1	Q16831	310 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	WDR72	Q3MJ13	1102 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	HGSNAT	Q68CP4	663 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CYP26C1	Q6V0L0	522 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	C16orf59	Q7L2K0	433 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TMTC1	Q8IUR5	882 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FAM71A	Q8IYT1	594 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	URGCP	Q8TCY9	931 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	BAD	Q92934	168 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	DDX27	Q96GQ7	796 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ZNF560	Q96MR9	790 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	UROC1	Q96N76	676 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CASD1	Q96PB1	797 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CHP1	Q99653	195 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	TBC1D13	Q9NVG8	400 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	PCDH10	Q9P2E7	1040 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	ARHGAP20	Q9P2F6	1191 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	NXF1	Q9UBU9	619 aa	Known RBP	10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	POLI	Q9UNA4	740 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	CNTN6	Q9UQ52	1028 aa		10.28	□□□□□ -0.76
CACNA1A-223	ENST00000636058	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.27	□□□□□ -0.76
CACNA1A-223	ENST00000636058	MKI67	P46013	3256 aa	Known RBP	10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CASTOR2	A6NHX0	329 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SOWAHD	A6NJG2	315 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KPNA7	A9QM74	516 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PODXL	O00592	558 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SPTLC1	O15269	473 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ARHGAP6	O43182	974 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NRDC	O43847	1150 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	EVI5	O60447	810 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	GFPT2	O94808	682 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DDHD2	O94830	711 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	AMH	P03971	560 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CCDC172	P0C7W6	258 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CLCNKB	P51801	687 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	LILRA4	P59901	499 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	WDR5	P61964	334 aa	Known RBP	10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TNNC1	P63316	161 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ARID5A	Q03989	594 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SV2C	Q496J9	727 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	LIMS2	Q7Z4I7	341 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	COLGALT2	Q8IYK4	626 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ABI1	Q8IZP0	508 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PIAS4	Q8N2W9	510 aa	Predicted RBP	10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	TOP1MT	Q969P6	601 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PAAF1	Q9BRP4	392 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SDCBP2	Q9H190	292 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CYP3A43	Q9HB55	503 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CISH	Q9NSE2	258 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	GDAP2	Q9NXN4	497 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CACNG4	Q9UBN1	327 aa		10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	BZW2	Q9Y6E2	419 aa	Known RBP	10.27	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SSU72P8	A0A1W2PR75	194 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CCDC85C	A6NKD9	419 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CYP26A1	O43174	497 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	B4GALT3	O60512	393 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DGKI	O75912	1065 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PLEK	P08567	350 aa	Predicted RBP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	WEE2	P0C1S8	567 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	IGFBP6	P24592	240 aa	Predicted RBP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CLCN1	P35523	988 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	USP8	P40818	1118 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	RAP1GAP	P47736	663 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KCNJ6	P48051	423 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	AARS	P49588	968 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	GATM	P50440	423 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZNF132	P52740	706 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	EPHB4	P54760	987 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	YWHAE	P62258	255 aa	Known RBP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	DEFB103A	P81534	67 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	PTK2	Q05397	1052 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	KLHL30	Q0D2K2	578 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	INCA1	Q0VD86	236 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ASTE1	Q2TB18	679 aa	Predicted RBP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	CD300LG	Q6UXG3	332 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	RAD9B	Q6WBX8	426 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SCARA5	Q6ZMJ2	495 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZNF365	Q70YC5	407 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	ZNF280B	Q86YH2	543 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	GPIHBP1	Q8IV16	184 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	C3orf58	Q8NDZ4	430 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	OLIG1	Q8TAK6	271 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SYT11	Q9BT88	431 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	MRPL9	Q9BYD2	267 aa	Known RBP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	HAUS4	Q9H6D7	363 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	SMYD3	Q9H7B4	428 aa		10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.26	□□□□□ -0.77
CACNA1A-223	ENST00000636058	RC3H2	Q9HBD1	1191 aa	Known RBP	10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms