RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ADH1AP07327 375 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TMEM191BP0C7N4 346 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 RPL17P18621 184 aaKnown RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TNNI1P19237 187 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 CCNE1P24864 410 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 POLR2BP30876 1174 aaKnown RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TAF6P49848 677 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 CLCN4P51793 760 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 MRPS5P82675 430 aaKnown RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 RBP5P82980 135 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 LRRC63Q05C16 580 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 STIM1Q13586 685 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 LEXMQ3ZCV2 418 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 VARS2Q5ST30 1063 aaKnown RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 CEP135Q66GS9 1140 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 LLGL2Q6P1M3 1020 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 LILRA6Q6PI73 481 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 FOXR2Q6PJQ5 311 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 RSPO2Q6UXX9 243 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 EP400NLQ6ZTU2 488 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ANKS3Q6ZW76 656 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TRAPPC11Q7Z392 1133 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ZC3H3Q8IXZ2 948 aaKnown RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 CSGALNACT2Q8N6G5 542 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 LRRC52Q8N7C0 313 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 APPL2Q8NEU8 664 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TMC2Q8TDI7 906 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ANKRD36BP1Q96IX9 119 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 SENP8Q96LD8 212 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 CGRRF1Q99675 332 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 NUP62CLQ9H1M0 184 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 BARX2Q9UMQ3 279 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 AGAP1Q9UPQ3 857 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TRIM49BA6NDI0 452 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 LRRIQ3A6PVS8 624 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 KPNA7A9QM74 516 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 H7C4K7 107 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 CETN3O15182 167 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ADAM12O43184 909 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 OAZ2O95190 189 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 EPCAMP16422 314 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TYMPP19971 482 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 PSMC2P35998 433 aaKnown RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 PNPLA4P41247 253 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 DLG4P78352 724 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 FKBP3Q00688 224 aaKnown RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ENPEPQ07075 957 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 AAK1Q2M2I8 961 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 C1orf220Q5T0J3 134 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TTI2Q6NXR4 508 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ANKRD54Q6NXT1 300 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 SYCE2Q6PIF2 218 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 DSTYKQ6XUX3 929 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 PALB2Q86YC2 1186 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 CASP10Q92851 521 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 EEF2KMTQ96G04 330 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ASB2Q96Q27 587 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TSG101Q99816 390 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 PLXNA3P51805 1871 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 IKBKBO14920 756 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 TGM5O43548 720 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 CST3P01034 146 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-210ENST00000635675 C4BPAP04003 597 aaKnown RBP10.49□□□□□ -0.73
LINC00339-210ENST00000635675 CYP11A1P05108 521 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 KRT19P08727 400 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 SRGAP2BP0DMP2 458 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 HOXB8P17481 243 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-210ENST00000635675 OR1D2P34982 312 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 VAMP7P51809 220 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 AP3M2P53677 418 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 RAB33AQ14088 237 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 SV2CQ496J9 727 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 SLC8B1Q6J4K2 584 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 KLHL10Q6JEL2 608 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 INTS8Q75QN2 995 aaKnown RBP10.49□□□□□ -0.73
LINC00339-210ENST00000635675 GLYCTKQ8IVS8 523 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 FAM186BQ8IYM0 893 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 HDAC7Q8WUI4 952 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 NELFBQ8WX92 580 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 HPDLQ96IR7 371 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 ZNF560Q96MR9 790 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 DUSP9Q99956 384 aaKnown RBP10.49□□□□□ -0.73
LINC00339-210ENST00000635675 S1PR5Q9H228 398 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 GDAP2Q9NXN4 497 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 CD207Q9UJ71 328 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 FBXL5Q9UKA1 691 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 TIMM13Q9Y5L4 95 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-210ENST00000635675 CDY1Q9Y6F8 540 aa10.49□□□□□ -0.73
LINC00339-210ENST00000635675 MTCL1Q9Y4B5 1905 aaKnown RBP10.48□□□□□ -0.73
LINC00339-210ENST00000635675 ARHGEF37A1IGU5 675 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 CYB561D2O14569 222 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 ABLIM3O94929 683 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 MBD3O95983 291 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 GLUD1P00367 558 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 SPATA31D3P0C874 917 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 ODC1P11926 461 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 BMP1P13497 986 aa10.48□□□□□ -0.73
LINC00339-210ENST00000635675 KCNQ1P51787 676 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 583.1 ms