RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 GPR156Q8NFN8 814 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 DIS3LQ8TF46 1054 aaKnown RBP3.4□□□□□ -1.87
PSPC1-208ENST00000635562 SNX33Q8WV41 574 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 ZFPM2Q8WW38 1151 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 RIN2Q8WYP3 895 aaPredicted RBP3.4□□□□□ -1.87
PSPC1-208ENST00000635562 GJA10Q969M2 543 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 CLIP3Q96DZ5 547 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 SPAG5Q96R06 1193 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 TAAR9Q96RI9 348 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 NMRK2Q9NPI5 230 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 DMRT3Q9NQL9 472 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 RASSF1Q9NS23 344 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 RBM12Q9NTZ6 932 aaKnown RBP3.4□□□□□ -1.87
PSPC1-208ENST00000635562 DCAF16Q9NXF7 216 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 NR2E1Q9Y466 385 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 TTLL3Q9Y4R7 772 aa3.4□□□□□ -1.87
PSPC1-208ENST00000635562 CCDC154A6NI56 674 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 VSTM5A8MXK1 200 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 J3KRW8 73 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ERC2O15083 957 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 IPO8O15397 1037 aaKnown RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 MTSS1O43312 755 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 CDC14BO60729 498 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 TMCC2O75069 709 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 CCDC159P0C7I6 412 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF888P0CJ79 500 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 SETSIPP0DME0 302 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 HSPA6P17066 643 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 MAKP20794 623 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ADD2P35612 726 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 SLC6A9P48067 706 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 CCT5P48643 541 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 TRPC1P48995 793 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 SLC16A1P53985 500 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 WNT3AP56704 352 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 SNX16P57768 344 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 BPIFB3P59826 476 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 DSC2Q02487 901 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 HGFACQ04756 655 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 CHAF1AQ13111 956 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ADAM15Q13444 863 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 UBE3CQ15386 1083 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 MST1LQ2TV78 715 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 SWSAP1Q6NVH7 229 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 CPLX2Q6PUV4 134 aaKnown RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 LMBR1LQ6UX01 489 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 CCDC129Q6ZRS4 1044 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 Q6ZVL8 140 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 RSRC2Q7L4I2 434 aaKnown RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF575Q86XF7 245 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 PPM1NQ8N819 430 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 PLA2G15Q8NCC3 412 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 CACTINQ8WUQ7 758 aaKnown RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 LPPQ93052 612 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 GFM2Q969S9 779 aaKnown RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 TIFAQ96CG3 184 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 TBC1D31Q96DN5 1066 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 OR14A2Q96R54 314 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 PRRX2Q99811 253 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ENKD1Q9H0I2 346 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 NELFAQ9H3P2 528 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF703Q9H7S9 590 aaPredicted RBP3.39□□□□□ -1.87
PSPC1-208ENST00000635562 KIAA1586Q9HCI6 787 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 PRDM11Q9NQV5 511 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 SMYD2Q9NRG4 433 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 PRDM4Q9UKN5 801 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 SIK3Q9Y2K2 1263 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 PTPN22Q9Y2R2 807 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 RAD54L2Q9Y4B4 1467 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 ITIH6Q6UXX5 1313 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 RPTORQ8N122 1335 aa3.39□□□□□ -1.87
PSPC1-208ENST00000635562 A0A087X1B8 175 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 A0A1B0GVC2 190 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PMS2P1A4D2B8 440 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 TMEM110-MUSTN1A8MSY1 372 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 SMTNL1A8MU46 457 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 FAM171A2A8MVW0 826 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PES1O00541 588 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 TOR1BO14657 336 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 APAF1O14727 1248 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ARHGAP6O43182 974 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 AP1G1O43747 822 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 SGTAO43765 313 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PHF2O75151 1096 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 OFD1O75665 1012 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 AGR2O95994 175 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PEX11BO96011 259 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 GSPT1P15170 499 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 KIF5BP33176 963 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 RAD52P43351 418 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 MRE11P49959 708 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ADCY7P51828 1080 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 COPAP53621 1224 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 HMGN5P82970 282 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 CALD1Q05682 793 aaKnown RBP3.38□□□□□ -1.87
PSPC1-208ENST00000635562 STK3Q13188 491 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 PRKG2Q13237 762 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 TUBA3CQ13748 450 aa3.38□□□□□ -1.87
PSPC1-208ENST00000635562 ZNF267Q14586 743 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms