RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 C8AP07357 584 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC00339-207ENST00000634712 ODC1P11926 461 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 HOXD13P35453 343 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 TAF6P49848 677 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 MRPL58Q14197 206 aaKnown RBP16.97■□□□□ 0.31
LINC00339-207ENST00000634712 SURF1Q15526 300 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
LINC00339-207ENST00000634712 SLC8B1Q6J4K2 584 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 OTOP3Q7RTS5 596 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 EFCAB13Q8IY85 973 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 TDRD5Q8NAT2 981 aaKnown RBP16.97■□□□□ 0.31
LINC00339-207ENST00000634712 ZNF461Q8TAF7 563 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 GOLGA5Q8TBA6 731 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 SENP8Q96LD8 212 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 OXCT2Q9BYC2 517 aaPredicted RBP16.97■□□□□ 0.31
LINC00339-207ENST00000634712 RHOBTB2Q9BYZ6 727 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 GOLPH3LQ9H4A5 285 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 MUTYHQ9UIF7 546 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 FBXL5Q9UKA1 691 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 POLIQ9UNA4 740 aa16.97■□□□□ 0.31
LINC00339-207ENST00000634712 TIMM13Q9Y5L4 95 aaPredicted RBP16.97■□□□□ 0.31
LINC00339-207ENST00000634712 ANO9A1A5B4 782 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 PPEF2O14830 753 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 TGFB1I1O43294 461 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 XYLBO75191 536 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 TMEM191BP0C7N4 346 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 ANP32AP39687 249 aaKnown RBP16.96■□□□□ 0.31
LINC00339-207ENST00000634712 AARSP49588 968 aaKnown RBP eCLIP16.96■□□□□ 0.31
LINC00339-207ENST00000634712 CYP2J2P51589 502 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 ROR1Q01973 937 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 STK4Q13043 487 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 BMT2Q1RMZ1 405 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 RTL10Q7L3V2 364 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 METTL23Q86XA0 190 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 RDH13Q8NBN7 331 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 SLC7A14Q8TBB6 771 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 ANKRD36BP1Q96IX9 119 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 ZNF560Q96MR9 790 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 PDE11AQ9HCR9 933 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
LINC00339-207ENST00000634712 USTQ9Y2C2 406 aa16.96■□□□□ 0.31
LINC00339-207ENST00000634712 C2CD4DB7Z1M9 353 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 PRRG1O14668 218 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 TBC1D4O60343 1298 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 OAZ2O95190 189 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 KIF20AO95235 890 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 KRT19P08727 400 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 CPB1P15086 417 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 TYMPP19971 482 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 PNPLA4P41247 253 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 SV2CQ496J9 727 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 TPGS2Q68CL5 300 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 OVOS1Q6IE37 1185 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 CBWD2Q8IUF1 395 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 CSGALNACT2Q8N6G5 542 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 XXYLT1Q8NBI6 393 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 FEZF2Q8TBJ5 459 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 ZNF707Q96C28 371 aaPredicted RBP16.95■□□□□ 0.3
LINC00339-207ENST00000634712 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
LINC00339-207ENST00000634712 DSEQ9UL01 958 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 AGAP1Q9UPQ3 857 aa16.95■□□□□ 0.3
LINC00339-207ENST00000634712 ANK1P16157 1881 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 WDR27A2RRH5 827 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 CYB561D2O14569 222 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 CCL16O15467 120 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 EXOC3O60645 756 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 ABLIM3O94929 683 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 TNNC2P02585 160 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 ITGB3P05106 788 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 PRR29P0C7W0 189 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 ATF2P15336 505 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 HOXA9P31269 272 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 GBP2P32456 591 aaPredicted RBP16.94■□□□□ 0.3
LINC00339-207ENST00000634712 SNRNP35Q16560 246 aaKnown RBP16.94■□□□□ 0.3
LINC00339-207ENST00000634712 FNBP1Q96RU3 617 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 CYP4F11Q9HBI6 524 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 ITGA11Q9UKX5 1188 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 CLUHO75153 1309 aa16.94■□□□□ 0.3
LINC00339-207ENST00000634712 OR6C75A6NL08 312 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 KPNA7A9QM74 516 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 SPTLC1O15269 473 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 LRG1P02750 347 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 TNNI1P19237 187 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 POLR2BP30876 1174 aaKnown RBP16.93■□□□□ 0.3
LINC00339-207ENST00000634712 WNT7BP56706 349 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 RBP5P82980 135 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 DPYDQ12882 1025 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 DUOXA2Q1HG44 320 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 TMEM31Q5JXX7 168 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 ZDHHC14Q8IZN3 488 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 THEM5Q8N1Q8 247 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 C1orf127Q8N9H9 656 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 KIAA0895Q8NCT3 520 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 LIMD1Q9UGP4 676 aa16.93■□□□□ 0.3
LINC00339-207ENST00000634712 AFF4Q9UHB7 1163 aaKnown RBP16.93■□□□□ 0.3
LINC00339-207ENST00000634712 HOOK1Q9UJC3 728 aaKnown RBP16.93■□□□□ 0.3
LINC00339-207ENST00000634712 MAFFQ9ULX9 164 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms