RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ATF2P15336 505 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 MAGEA9P43362 315 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 MAPK7Q13164 816 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 RSPO4Q2I0M5 234 aaPredicted RBP16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 CTXN3Q4LDR2 81 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 SV2BQ7L1I2 683 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 DAW1Q8N136 415 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 ELSPBP1Q96BH3 223 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 REEP2Q9BRK0 252 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 TMEM134Q9H6X4 195 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 BRD9Q9H8M2 597 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 ZFP14Q9HCL3 533 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 LARSQ9P2J5 1176 aaKnown RBP16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 PHLPP2Q6ZVD8 1323 aa16.94■□□□□ 0.3
SNRNP48-203ENST00000634363 DCHS1Q96JQ0 3298 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 A0A087X0B3 334 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 NPHP3-ACAD11A0A0J9YXS1 232 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ZNF197O14709 1029 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 PLS3P13797 630 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 MCM4P33991 863 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 SMTNP53814 917 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ADCY1Q08828 1119 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 SEZ6Q53EL9 994 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ARSHQ5FYA8 562 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 XKR4Q5GH76 650 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 FAM78AQ5JUQ0 283 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 CYP4A22Q5TCH4 519 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 RESP18Q5W5W9 173 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 IQCEQ6IPM2 695 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 PDZD4Q76G19 769 aaPredicted RBP16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ELMOD1Q8N336 334 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 CLDN23Q96B33 292 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 DHX58Q96C10 678 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ZBTB45Q96K62 511 aaPredicted RBP16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ZNF512Q96ME7 567 aaPredicted RBP16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 PYM1Q9BRP8 204 aaKnown RBP16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 TRMT61BQ9BVS5 477 aaKnown RBP16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ZHX3Q9H4I2 956 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 PTPRHQ9HD43 1115 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 ZSCAN32Q9NX65 697 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 FBXL5Q9UKA1 691 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 PCDHGA2Q9Y5H1 932 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 INSL5Q9Y5Q6 135 aa16.93■□□□□ 0.3
SNRNP48-203ENST00000634363 NRG2O14511 850 aaPredicted RBP16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 SYN3O14994 580 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 SPTLC1O15269 473 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 SLC16A4O15374 487 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 MCF2P10911 925 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 MYL4P12829 197 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 GJA1P17302 382 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 RPL9P32969 192 aaKnown RBP16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 PRSS36Q5K4E3 855 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 ADALQ6DHV7 355 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 TAS1R3Q7RTX0 852 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 TCEAL8Q8IYN2 117 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 HS6ST3Q8IZP7 471 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 IQUBQ8NA54 791 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 SECISBP2LQ93073 1101 aaKnown RBP16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 ZSWIM3Q96MP5 696 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 CUEDC2Q9H467 287 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 PARVGQ9HBI0 331 aa16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 AVENQ9NQS1 362 aaPredicted RBP16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 RBM19Q9Y4C8 960 aaKnown RBP16.92■□□□□ 0.3
SNRNP48-203ENST00000634363 MYH11P35749 1972 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 H0YCG3 227 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 TBC1D4O60343 1298 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 KCNE1P15382 129 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 GDI1P31150 447 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 CCR2P41597 374 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 RPS9P46781 194 aaKnown RBP16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 MTAPQ13126 283 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 FZD5Q13467 585 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 MPZL3Q6UWV2 235 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 DYMQ7RTS9 669 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 ZBTB44Q8NCP5 570 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 SPIRE2Q8WWL2 714 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 LRRC27Q9C0I9 530 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 GDPD2Q9HCC8 539 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 CHMP5Q9NZZ3 219 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 ARHGAP28Q9P2N2 729 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 ANKFY1Q9P2R3 1169 aa16.91■□□□□ 0.3
SNRNP48-203ENST00000634363 TICRRQ7Z2Z1 1910 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 CPB1P15086 417 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 CMA1P23946 247 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 FCARP24071 287 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 VIPR2P41587 438 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 AMPD3Q01432 767 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 SPAG1Q07617 926 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 TWF1Q12792 350 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 STRN3Q13033 797 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 MRPL58Q14197 206 aaKnown RBP16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 E2F4Q16254 413 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 TPGS2Q68CL5 300 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 ZNF280DQ6N043 979 aa16.9■□□□□ 0.3
SNRNP48-203ENST00000634363 RNF19BQ6ZMZ0 732 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms