RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 ZGPATQ8N5A5 531 aaKnown RBP3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ZCRB1Q8TBF4 217 aaKnown RBP3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ACTRT2Q8TDY3 377 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 JADE3Q92613 823 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TMX3Q96JJ7 454 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MRGPRX4Q96LA9 322 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ZSWIM1Q9BR11 485 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 AIFM2Q9BRQ8 373 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GSTO2Q9H4Y5 243 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 LDAHQ9H6V9 325 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ALG13Q9NP73 1137 aaKnown RBP3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SEMA4GQ9NTN9 838 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FOXJ2Q9P0K8 574 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 INTUQ9ULD6 942 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 POLHQ9Y253 713 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 IPPQ9Y573 584 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SPATA31A3Q5VYP0 1347 aa3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ARHGEF17Q96PE2 2063 aaPredicted RBP3.83□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CDHR4A6H8M9 788 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 WNT10BO00744 389 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GABRDO14764 452 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 KIAA0391O15091 583 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GRM6O15303 877 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 HTRA2O43464 458 aaPredicted RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PEX1O43933 1283 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 VCAM1P19320 739 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CDK11BP21127 795 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLC6A2P23975 617 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ANXA11P50995 505 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GUCY2FP51841 1108 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 NOMO3P69849 1222 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TLE1Q04724 770 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FOXF2Q12947 444 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TARDBPQ13148 414 aaKnown RBP eCLIP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PTPRRQ15256 657 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 NOMO2Q5JPE7 1267 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GADL1Q6ZQY3 521 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLC44A3Q8N4M1 653 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 Q8N9P0 234 aaPredicted RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 BOLLQ8N9W6 283 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 Q8NA96 180 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FAM98AQ8NCA5 519 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FBXO18Q8NFZ0 1043 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TBC1D15Q8TC07 691 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SSH3Q8TE77 659 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 NSUN6Q8TEA1 469 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 STON2Q8WXE9 905 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 WASF1Q92558 559 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 DDX17Q92841 729 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 NACC2Q96BF6 587 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PTCD3Q96EY7 689 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MARS2Q96GW9 593 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PGBD1Q96JS3 809 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TIMP4Q99727 224 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SPATA5L1Q9BVQ7 753 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 KMT5AQ9NQR1 393 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TUBD1Q9UJT1 453 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TRHDEQ9UKU6 1024 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 RUVBL1Q9Y265 456 aaKnown RBP3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ENTPD2Q9Y5L3 495 aa3.82□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CCDC195A0A1B0GUA6 201 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GCOM1H8Y6P7 765 aaPredicted RBP3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FCER1AP12319 257 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 C5AR1P21730 350 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 IARSP41252 1262 aaKnown RBP3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 NXPH1P58417 271 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SIM1P81133 766 aaPredicted RBP3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ITIH3Q06033 890 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TMEM240Q5SV17 173 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 EFCAB2Q5VUJ9 269 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 KIAA1614Q5VZ46 1190 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 VWA1Q6PCB0 445 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PTF1AQ7RTS3 328 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 DCBLD1Q8N8Z6 715 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ANKS1AQ92625 1134 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SCAMP4Q969E2 229 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 COA7Q96BR5 231 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FAM167AQ96KS9 214 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TEKT5Q96M29 485 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 UROC1Q96N76 676 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 PUS7Q96PZ0 661 aaKnown RBP3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MYOCQ99972 504 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 LRFN3Q9BTN0 628 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 SLC29A3Q9BZD2 475 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CFAP97Q9P2B7 532 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 USP25Q9UHP3 1055 aa3.81□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 TCRBV7S2A1N4TA0A589 114 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 DNAJC9-AS1A6NH13 148 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 FZD9O00144 591 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 XPOTO43592 962 aaKnown RBP3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 AGFG2O95081 481 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 CD1AP06126 327 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MYBL2P10244 700 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 HOXB6P17509 224 aaKnown RBP3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 MTMR1Q13613 665 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 DYRK1AQ13627 763 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 ACAP2Q15057 778 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 GEN1Q17RS7 908 aa3.8□□□□□ -1.8
NPHP3-ACAD11-202ENST00000632629 UTP14CQ5TAP6 766 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms