RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TRADDQ15628 312 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 CEP135Q66GS9 1140 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 FCRLBQ6BAA4 426 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 WDR93Q6P2C0 686 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 KLHDC10Q6PID8 442 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 DHX32Q7L7V1 743 aaKnown RBP5.24□□□□□ -1.57
SDCBP-213ENST00000630925 MAMDC2Q7Z304 686 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-213ENST00000630925 CCNJLQ8IV13 435 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 TTC39CQ8N584 583 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 GALNT6Q8NCL4 622 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 BBOF1Q8ND07 529 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 ZNF280CQ8ND82 737 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 KCNN1Q92952 543 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 KLRG1Q96E93 195 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 EPSTI1Q96J88 318 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 CGRRF1Q99675 332 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 BRD8Q9H0E9 1235 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 STMN4Q9H169 189 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-213ENST00000630925 GLT8D2Q9H1C3 349 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 NDST4Q9H3R1 872 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 TASP1Q9H6P5 420 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 COPS7BQ9H9Q2 264 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-213ENST00000630925 PRDM6Q9NQX0 595 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 ZBTB40Q9NUA8 1239 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.24□□□□□ -1.57
SDCBP-213ENST00000630925 NINJ2Q9NZG7 142 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 ZKSCAN5Q9Y2L8 839 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 PCDHA9Q9Y5H5 950 aa5.24□□□□□ -1.57
SDCBP-213ENST00000630925 CEP350Q5VT06 3117 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 A2ML1A8K2U0 1454 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 MED14O60244 1454 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 COL16A1Q07092 1604 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 KDRP35968 1356 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 ZMYM3Q14202 1370 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 NUDT19A8MXV4 375 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 L7N2F9 121 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 GTPBP1O00178 669 aaKnown RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 VWA5AO00534 786 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 DNAJA2O60884 412 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 FAM155BO75949 473 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 VAV1P15498 845 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 RHOQP17081 205 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 CES1P23141 567 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 ITPKAP23677 461 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 EEF1GP26641 437 aaKnown RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 TCF7P36402 384 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 EPS15P42566 896 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 GRIA4P48058 902 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 CCT4P50991 539 aaKnown RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 MMP16P51512 607 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 C1QTNF8P60827 252 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 STK4Q13043 487 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 NMIQ13287 307 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 NEUROD1Q13562 356 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 CDCP2Q5VXM1 449 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 TTC19Q6DKK2 380 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 CENPQQ7L2Z9 268 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 NLRC3Q7RTR2 1065 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 DGLUCYQ7Z3D6 616 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 ARMC9Q7Z3E5 817 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 KRT25Q7Z3Z0 450 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 BNIPLQ7Z465 357 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 NCAPG2Q86XI2 1143 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 MAML2Q8IZL2 1156 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 SRBD1Q8N5C6 995 aaKnown RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 TRIML2Q8N7C3 387 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 MFSD2AQ8NA29 543 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 AGR3Q8TD06 166 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 C7orf43Q8WVR3 580 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 ATP6V0A1Q93050 837 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 PMEPA1Q969W9 287 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 COA7Q96BR5 231 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 VWCEQ96DN2 955 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 FAM120BQ96EK7 910 aaKnown RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 METTL22Q9BUU2 404 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 FUT8Q9BYC5 575 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 KRT23Q9C075 422 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 GBP3Q9H0R5 595 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 ZFYVE1Q9HBF4 777 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 HPS4Q9NQG7 708 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 MBIPQ9NS73 344 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 SEPT11Q9NVA2 429 aaKnown RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 ABI2Q9NYB9 513 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 IL20Q9NYY1 176 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 SPATA7Q9P0W8 599 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 GMIPQ9P107 970 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 WHRNQ9P202 907 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 HOOK1Q9UJC3 728 aaKnown RBP5.23□□□□□ -1.57
SDCBP-213ENST00000630925 LHX6Q9UPM6 363 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 ASB3Q9Y575 518 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 PCDHA11Q9Y5I1 949 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 HRH3Q9Y5N1 445 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 BACE2Q9Y5Z0 518 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 EP400Q96L91 3159 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 KDM5CP41229 1560 aa5.23□□□□□ -1.57
SDCBP-213ENST00000630925 H7BY64 318 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 CDKL5O76039 1030 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 YEATS4O95619 227 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 NPPAP01160 153 aa5.22□□□□□ -1.57
SDCBP-213ENST00000630925 IFNB1P01574 187 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms