RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 CCDC89Q8N998 374 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 USP38Q8NB14 1042 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 GALNT11Q8NCW6 608 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 SLAIN1Q8ND83 568 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 FLAD1Q8NFF5 587 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 OR10Z1Q8NGY1 313 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 GRPEL2Q8TAA5 225 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 NPLOC4Q8TAT6 608 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 SPATA20Q8TB22 786 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 MDM1Q8TC05 714 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CPLX3Q8WVH0 158 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 ZFPM2Q8WW38 1151 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CKAP2Q8WWK9 683 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 SEC14L1Q92503 715 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TRIB2Q92519 343 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 JADE3Q92613 823 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 MCUR1Q96AQ8 359 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 FAM149B1Q96BN6 582 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TAMM41Q96BW9 452 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CFAP36Q96G28 342 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 ZNF274Q96GC6 653 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 METTL2AQ96IZ6 378 aaKnown RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 FAR2Q96K12 515 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 MAGEB18Q96M61 343 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 FAM20AQ96MK3 541 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 SAMD11Q96NU1 681 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 NOX5Q96PH1 765 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 LRRC37BQ96QE4 947 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TGS1Q96RS0 853 aaKnown RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 CDRT15Q96T59 188 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 YME1L1Q96TA2 773 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 KRT12Q99456 494 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 FMO2Q99518 471 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TSG101Q99816 390 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 MYD88Q99836 296 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 DDX50Q9BQ39 737 aaKnown RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 FERMT1Q9BQL6 677 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 BTBD10Q9BSF8 475 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 C17orf80Q9BSJ5 609 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 IER2Q9BTL4 223 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TDRD1Q9BXT4 1180 aaKnown RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 RHOBTB2Q9BYZ6 727 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TXLNGYQ9BZA5 131 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 GRIP2Q9C0E4 1043 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 OR2B2Q9GZK3 357 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 PDGFDQ9GZP0 370 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 SENP6Q9GZR1 1112 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 CLPBQ9H078 707 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 KIAA1683Q9H0B3 1180 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 ZMYND12Q9H0C1 365 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TMEM60Q9H2L4 133 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 KCNN2Q9H2S1 579 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 RNF41Q9H4P4 317 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 EBF3Q9H4W6 596 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 AZI2Q9H6S1 392 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 IFT22Q9H7X7 185 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 DNAJC18Q9H819 358 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 NHEJ1Q9H9Q4 299 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 NEK6Q9HC98 313 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 POLMQ9NP87 494 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 UBN1Q9NPG3 1134 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 RIC8AQ9NPQ8 531 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CD93Q9NPY3 652 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 C8orf4Q9NR00 106 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 MAN1C1Q9NR34 630 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 ZNF277Q9NRM2 450 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 FARSBQ9NSD9 589 aaKnown RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 EMILIN3Q9NT22 766 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 SLC38A7Q9NVC3 462 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 DDX18Q9NVP1 670 aaKnown RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 RRN3Q9NYV6 651 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 C9orf78Q9NZ63 289 aaPredicted RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 GPRC5DQ9NZD1 345 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 EHD2Q9NZN4 543 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 NCKIPSDQ9NZQ3 722 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 EMC3Q9P0I2 261 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 KIF17Q9P2E2 1029 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 IGSF9Q9P2J2 1179 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 LRWD1Q9UFC0 647 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TBK1Q9UHD2 729 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 KLF15Q9UIH9 416 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CNOT7Q9UIV1 285 aaKnown RBP2.02□□□□□ -2.09
TCF4-264ENST00000628391 TSPYL4Q9UJ04 414 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 ZFP69BQ9UJL9 534 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 HAO1Q9UJM8 370 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 SALL4Q9UJQ4 1053 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TMEM59LQ9UK28 342 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CDH7Q9ULB5 785 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 KCNH3Q9ULD8 1083 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CAPN11Q9UMQ6 739 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 DNM3Q9UQ16 869 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 SPG7Q9UQ90 795 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CLEC11AQ9Y240 323 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 STARD13Q9Y3M8 1113 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 RWDD3Q9Y3V2 267 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 PCDHGA3Q9Y5H0 932 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 ACTL7BQ9Y614 415 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 CLIC4Q9Y696 253 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 TACC3Q9Y6A5 838 aa2.02□□□□□ -2.09
TCF4-264ENST00000628391 MAD1L1Q9Y6D9 718 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms