RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 CCL14Q16627 93 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 JADE1Q6IE81 842 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 C1orf127Q8N9H9 656 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 TSEN2Q8NCE0 465 aaKnown RBP20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 NXF1Q9UBU9 619 aaKnown RBP20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 TRPM7Q96QT4 1865 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 TTI1O43156 1089 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 IL18RAPO95256 599 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 CYP2C19P33261 490 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 CTNNA1P35221 906 aaKnown RBP20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 GPS2Q13227 327 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 EMBQ6PCB8 327 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 TRIM72Q6ZMU5 477 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 MMS22LQ6ZRQ5 1243 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 DDX42Q86XP3 938 aaKnown RBP eCLIP20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 SLC5A4Q9NY91 659 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 ADAM22Q9P0K1 906 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 GNEQ9Y223 722 aaKnown RBP20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 PCDHA3Q9Y5H8 950 aa20.95■□□□□ 0.94
CHRNA4-209ENST00000627000 MYBL1P10243 752 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 RAP1GAPP47736 663 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 POU5F1Q01860 360 aaKnown RBP20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 PTP4A2Q12974 167 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 PAK2Q13177 524 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 TERF2Q15554 542 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 KIZQ2M2Z5 673 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 OLFML2BQ68BL8 750 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 ZDHHC14Q8IZN3 488 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 FAM49AQ9H0Q0 323 aaPredicted RBP20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 GINS2Q9Y248 185 aa20.94■□□□□ 0.94
CHRNA4-209ENST00000627000 GJB6O95452 261 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 CTNNA2P26232 953 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 SLC10A6Q3KNW5 377 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 DAB2IPQ5VWQ8 1189 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 RIN2Q8WYP3 895 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 CAVIN3Q969G5 261 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 TRIM11Q96F44 468 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 ACBD3Q9H3P7 528 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 SLITRK6Q9H5Y7 841 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 CCDC66A2RUB6 948 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 A6NJR5 290 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 BHMG1C9JSJ3 638 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 SYF2O95926 243 aaKnown RBP20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 ZNF865P0CJ78 1059 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 GUCY2FP51841 1108 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 PHF13Q86YI8 300 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 TFAP2BQ92481 460 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 KAT2BQ92831 832 aa20.93■□□□□ 0.94
CHRNA4-209ENST00000627000 TCRBV7S2A1N4TA0A589 114 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 AGPSO00116 658 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 ERLIN2O94905 339 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 ITGB3P05106 788 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 CYP2B6P20813 491 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 AARSP49588 968 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 FAM193AP78312 1265 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 NAP1L3Q99457 506 aaPredicted RBP20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 SMIM10L2AP0DMW4 78 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 SMIM10L2BP0DMW5 78 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 ECHS1P30084 290 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 GGCXP38435 758 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 CDH8P55286 799 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 LLGL1Q15334 1064 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 WDR72Q3MJ13 1102 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 SEL1L2Q5TEA6 688 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 TLK2Q86UE8 772 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 CCDC26Q8TAB7 109 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 CXorf38Q8TB03 319 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 TRIM51Q9BSJ1 452 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 SDCBP2Q9H190 292 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 CDHR5Q9HBB8 845 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 FAN1Q9Y2M0 1017 aa20.92■□□□□ 0.94
CHRNA4-209ENST00000627000 MANSC4A6NHS7 340 aaPredicted RBP20.91■□□□□ 0.94
CHRNA4-209ENST00000627000 MAMLD1Q13495 774 aa20.91■□□□□ 0.94
CHRNA4-209ENST00000627000 HIC1Q14526 733 aa20.91■□□□□ 0.94
CHRNA4-209ENST00000627000 LIN9Q5TKA1 542 aa20.91■□□□□ 0.94
CHRNA4-209ENST00000627000 C1orf131Q8NDD1 294 aaKnown RBP20.91■□□□□ 0.94
CHRNA4-209ENST00000627000 NEUROG2Q9H2A3 272 aa20.91■□□□□ 0.94
CHRNA4-209ENST00000627000 A0A1B0GUA9 196 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 MYO1FO00160 1098 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 F2P00734 622 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 RWDD2BP57060 319 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 ORC1Q13415 861 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 HLTFQ14527 1009 aaKnown RBP eCLIP20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 HSP90B2PQ58FF3 399 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 ZNF667Q5HYK9 610 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 C17orf99Q6UX52 265 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 MAATS1Q7Z4T9 603 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 PRELID2Q8N945 189 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 ADAMTS10Q9H324 1103 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 CITO14578 2027 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 GOLGA6L10A0A0M3HER8 536 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 PLEKHA7Q6IQ23 1121 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 CHADLQ6NUI6 762 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 ZNF410Q86VK4 478 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 USP6NLQ92738 828 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 VCPIP1Q96JH7 1222 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 CXCL16Q9H2A7 254 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 ASB7Q9H672 318 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 SMYD3Q9H7B4 428 aa20.9■□□□□ 0.94
CHRNA4-209ENST00000627000 VPS18Q9P253 973 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms