RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 FGBP02675 491 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 PNPLA4P41247 253 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 STAT1P42224 750 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 WDR5P61964 334 aaKnown RBP19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 SCARA5Q6ZMJ2 495 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 ZNF365Q70YC5 407 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 ZNF830Q96NB3 372 aaPredicted RBP19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 CASD1Q96PB1 797 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 ZNHIT6Q9NWK9 470 aaKnown RBP19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 POLIQ9UNA4 740 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 TBKBP1A7MCY6 615 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 PODXLO00592 558 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 PNMA6AP0CW24 399 aaPredicted RBP19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 P4HA1P13674 534 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 RPL9P32969 192 aaKnown RBP19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 KCNJ6P48051 423 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 TAF6P49848 677 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 CLCNKBP51801 687 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 TNNC1P63316 161 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 DEFB103AP81534 67 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 FAM193BQ96PV7 902 aaPredicted RBP19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 LBHD1Q9BQE6 289 aaPredicted RBP19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 GPR88Q9GZN0 384 aa19.11■□□□□ 0.65
PTCHD3-202ENST00000622555 PTPRSQ13332 1948 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 ZBBXA8MT70 800 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 FOXN3O00409 490 aaPredicted RBP19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 SOX5P35711 763 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 USP8P40818 1118 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 ASPAP45381 313 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 ARID5AQ03989 594 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 ASIC2Q16515 512 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 SV2CQ496J9 727 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 E4F1Q66K89 784 aaPredicted RBP19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 ZNF280BQ86YH2 543 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 SHC3Q92529 594 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 RABGGTAQ92696 567 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 SYN2Q92777 582 aaPredicted RBP19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 UROC1Q96N76 676 aa19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 BAG1Q99933 345 aaPredicted RBP19.1■□□□□ 0.65
PTCHD3-202ENST00000622555 NRDCO43847 1150 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 GFPT2O94808 682 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 DDHD2O94830 711 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 HNRNPH3P31942 346 aaKnown RBP19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 EPHB4P54760 987 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 PSRC1Q6PGN9 363 aaPredicted RBP19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 CCDC112Q8NEF3 446 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 RSPH1Q8WYR4 309 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 TOP1MTQ969P6 601 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 FAXDC2Q96IV6 333 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 PAAF1Q9BRP4 392 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 MRPL9Q9BYD2 267 aaKnown RBP19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 KCNF1Q9H3M0 494 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 AIPL1Q9NZN9 384 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 SNX9Q9Y5X1 595 aa19.09■□□□□ 0.65
PTCHD3-202ENST00000622555 KPNA7A9QM74 516 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 WEE2P0C1S8 567 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 DSC1Q08554 894 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 UPP1Q16831 310 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 PAN2Q504Q3 1202 aaKnown RBP19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 TMEM240Q5SV17 173 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 FAM117BQ6P1L5 589 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 WDR59Q6PJI9 974 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 FMNL3Q8IVF7 1028 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 JAKMIP2Q96AA8 810 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 MMS19Q96T76 1030 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 BCO2Q9BYV7 579 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 SMYD3Q9H7B4 428 aa19.08■□□□□ 0.65
PTCHD3-202ENST00000622555 SPTLC1O15269 473 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 B4GALT3O60512 393 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 DGKIO75912 1065 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 KRT5P13647 590 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 FERP16591 822 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 CD58P19256 250 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 RAP1GAPP47736 663 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 LILRA4P59901 499 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 YWHAEP62258 255 aaKnown RBP19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 MEA1Q16626 185 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 TMCO2Q7Z6W1 182 aaPredicted RBP19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 COLGALT2Q8IYK4 626 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 LRRC43Q8N309 656 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 PCDHB4Q9Y5E5 795 aa19.08■□□□□ 0.64
PTCHD3-202ENST00000622555 SKILP12757 684 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 ACO1P21399 889 aaKnown RBP19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 FECHP22830 423 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 CCZ1BP86790 482 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 CCZ1P86791 482 aaPredicted RBP19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 CYP26C1Q6V0L0 522 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 TMEM139Q8IV31 216 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 FAM71AQ8IYT1 594 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 C3orf58Q8NDZ4 430 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 CYP3A43Q9HB55 503 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 CISHQ9NSE2 258 aa19.07■□□□□ 0.64
PTCHD3-202ENST00000622555 B3GAT3O94766 335 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 CCDC172P0C7W6 258 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 IGFBP6P24592 240 aaPredicted RBP19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 OR1G1P47890 313 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 CDH8P55286 799 aa19.06■□□□□ 0.64
PTCHD3-202ENST00000622555 KLHL30Q0D2K2 578 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms