RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 MKRN3Q13064 507 aaKnown RBP10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 KYNUQ16719 465 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 IZUMO3Q5VZ72 239 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 SPOPLQ6IQ16 392 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 CATSPERGQ6ZRH7 1159 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 TRMT1LQ7Z2T5 733 aaKnown RBP10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 FUKQ8N0W3 1084 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 DEPTORQ8TB45 409 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCHCR1Q8TD31 782 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 SGSM3Q96HU1 749 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 RBM41Q96IZ5 413 aaKnown RBP10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 CCDC77Q9BR77 488 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 PLCD4Q9BRC7 762 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 C11orf70Q9BRQ4 267 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 ZNF302Q9NR11 478 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 PARVAQ9NVD7 372 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 EURLQ9NYK6 297 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 SLC12A4Q9UP95 1085 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 PPME1Q9Y570 386 aa10.21□□□□□ -0.77
IGHV3-54-201ENST00000622166 SSC5DA1L4H1 1573 aa10.21□□□□□ -0.78
IGHV3-54-201ENST00000622166 TMEM120BA0PK00 339 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 CFAP73A6NFT4 308 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TMEM191CA6NGB0 347 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 K7ERI5 159 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 DNALI1O14645 258 aaPredicted RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 THAP12O43422 761 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 MGRN1O60291 552 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 ACSL3O95573 720 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 LSM8O95777 96 aaKnown RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 CALB1P05937 261 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 CFHP08603 1231 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 VIMP08670 466 aaKnown RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TMEM191BP0C7N4 346 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 MMP8P22894 467 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 ACOT2P49753 483 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 MNAT1P51948 309 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TGFB2P61812 414 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TAP1Q03518 808 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 NR1H3Q13133 447 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TARBP2Q15633 366 aaKnown RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 GALNTL6Q49A17 601 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 CCDC38Q502W7 563 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 NBPF12Q5TAG4 269 aaPredicted RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 LMBRD2Q68DH5 695 aaPredicted RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 LLGL2Q6P1M3 1020 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 CYB5D1Q6P9G0 228 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZPBP2Q6X784 338 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZNF365Q70YC5 407 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TRPM8Q7Z2W7 1104 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TDRPQ86YL5 185 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 BRSK2Q8IWQ3 736 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZCCHC9Q8N567 271 aaKnown RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 DNERQ8NFT8 737 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 SLC16A10Q8TF71 515 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 ZBTB45Q96K62 511 aaPredicted RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 MSTO1Q9BUK6 570 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 TEX13BQ9BXU2 312 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 MTFR1LQ9H019 292 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 YY1AP1Q9H869 796 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 HAUS2Q9NVX0 235 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 RBAKQ9NYW8 714 aaPredicted RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 HACL1Q9UJ83 578 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 USP15Q9Y4E8 981 aaPredicted RBP10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 NUB1Q9Y5A7 615 aa10.2□□□□□ -0.78
IGHV3-54-201ENST00000622166 O00370 1275 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 LIASO43766 372 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 ADCY3O60266 1144 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 CDH16O75309 829 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 GJB6O95452 261 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 EGFRP00533 1210 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 ASS1P00966 412 aaKnown RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 RXRBP28702 533 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 CDH5P33151 784 aaPredicted RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 MAGEA4P43358 317 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 SLC18A1P54219 525 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 NOP14P78316 857 aaKnown RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 SP2Q02086 613 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 NFX1Q12986 1120 aaKnown RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 RASA2Q15283 850 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 SURF1Q15526 300 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 TRIP13Q15645 432 aaPredicted RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 STXBP2Q15833 593 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 SNCBQ16143 134 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 EAPPQ56P03 285 aaPredicted RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 NOL9Q5SY16 702 aaKnown RBP10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 TMEM270Q6UE05 265 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 ANKS1BQ7Z6G8 1248 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 PHLDB2Q86SQ0 1253 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 WDR49Q8IV35 697 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 NIPA2Q8N8Q9 360 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 CHST13Q8NET6 341 aa10.19□□□□□ -0.78
IGHV3-54-201ENST00000622166 OR5B17Q8NGF7 314 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms