RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 MED26O95402 600 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 TTLL1O95922 423 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 ETS2P15036 469 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 CASP5P51878 434 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 MROH9Q5TGP6 573 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 ZBTB49Q6ZSB9 765 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLTC-215ENST00000621829 ATP8B4Q8TF62 1192 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 PPP2R3CQ969Q6 453 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 UBE2OQ9C0C9 1292 aaKnown RBP12.12□□□□□ -0.47
CLTC-215ENST00000621829 TMBIM4Q9HC24 238 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 TELO2Q9Y4R8 837 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 SAC3D1A6NKF1 404 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 DFFAO00273 331 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 HOXC9P31274 260 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 KCNK10P57789 538 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 ROR2Q01974 943 aaKnown RBP12.12□□□□□ -0.47
CLTC-215ENST00000621829 SLC34A1Q06495 639 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 SAPCD2Q86UD0 394 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 KRT84Q9NSB2 600 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 LGALS3BPQ08380 585 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 OR6B3Q8NGW1 331 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 PDE9AO76083 593 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 KLK7P49862 253 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 Q3C1V9 767 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 JAMLQ86YT9 394 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 PLEKHG4BQ96PX9 1271 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 SERHL2Q9H4I8 314 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 SERHLQ9NQF3 203 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 RAB6BQ9NRW1 208 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 LMCD1Q9NZU5 365 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 NCF4Q15080 339 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 ANKRD40Q6AI12 368 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 GCNAQ96QF7 691 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 OSBPL3Q9H4L5 887 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 RALBP11234 206 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 JAK1P23458 1154 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 NCKAP1LP55160 1127 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 ZNF554Q86TJ5 538 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 CNBD1Q8NA66 436 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 KIFC1Q9BW19 673 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 DHX35Q9H5Z1 703 aaKnown RBP12.12□□□□□ -0.47
CLTC-215ENST00000621829 CD209Q9NNX6 404 aa12.12□□□□□ -0.47
CLTC-215ENST00000621829 MAGI1Q96QZ7 1491 aaPredicted RBP12.12□□□□□ -0.47
CLTC-215ENST00000621829 POTEMA6NI47 508 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 KCNJ1P48048 391 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 SEMA3FQ13275 785 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 SGO1Q5FBB7 561 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 MFSD14BQ5SR56 506 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 OLFM1Q99784 485 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 RRN3Q9NYV6 651 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 PRPF3O43395 683 aaKnown RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 USP10Q14694 798 aaKnown RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 CHSY1Q86X52 802 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 HMG20AQ9NP66 347 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 BCS1LQ9Y276 419 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 ATF4P18848 351 aaPredicted RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 CDH3P22223 829 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 TALDO1P37837 337 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.474e-7■■■■□ 25.6
CLTC-215ENST00000621829 IL5RAQ01344 420 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 CYP4A22Q5TCH4 519 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 PARVAQ9NVD7 372 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 TRIM49D1C9J1S8 452 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 IL6P05231 212 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 FCER1AP12319 257 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 VAMP7P51809 220 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 ALDH6A1Q02252 535 aaKnown RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 SETD3Q86TU7 594 aaPredicted RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 TMEM35BQ8NCS4 154 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 TMEM120AQ9BXJ8 343 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 INTS2Q9H0H0 1204 aaKnown RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 PRELID1Q9Y255 219 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 CSNK2BP67870 215 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 ARF5P84085 180 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 EFHC1Q5JVL4 640 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 TAF2Q6P1X5 1199 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 C1orf50Q9BV19 199 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 ZNF624Q9P2J8 865 aaPredicted RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 IL2RBP14784 551 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 PTPN4P29074 926 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 FMR1Q06787 632 aaKnown RBP eCLIP12.11□□□□□ -0.473e-7■■■□□ 18.2
CLTC-215ENST00000621829 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 BNC2Q6ZN30 1099 aaPredicted RBP12.11□□□□□ -0.47
CLTC-215ENST00000621829 SERPINB12Q96P63 405 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 ADAM30Q9UKF2 790 aa12.11□□□□□ -0.47
CLTC-215ENST00000621829 RTN2O75298 545 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms