RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 C2orf27AQ580R0 203 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 WDR45BQ5MNZ6 344 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SYCP2LQ5T4T6 812 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 NOTUMQ6P988 496 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 DNAJB7Q7Z6W7 309 aaPredicted RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 IFNLR1Q8IU57 520 aaPredicted RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 RHPN2Q8IUC4 686 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ITPRIPQ8IWB1 547 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PLEKHM2Q8IWE5 1019 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 FTSJ3Q8IY81 847 aaKnown RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 HS6ST3Q8IZP7 471 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 TMTC2Q8N394 836 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 FAM26EQ8N5C1 309 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 MDGA1Q8NFP4 955 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 BEST2Q8NFU1 509 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 RDM1Q8NG50 284 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SHKBP1Q8TBC3 707 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 USP33Q8TEY7 942 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PRPF31Q8WWY3 499 aaKnown RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 CRYGNQ8WXF5 182 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SLC7A3Q8WY07 619 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 CD101Q93033 1021 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 EVI5LQ96CN4 794 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 CHFRQ96EP1 664 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 DDX27Q96GQ7 796 aaKnown RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF668Q96K58 619 aaPredicted RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ZFP42Q96MM3 310 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF578Q96N58 590 aaPredicted RBP2.64□□□□□ -1.99
CPNE3-211ENST00000621526 UROC1Q96N76 676 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PNMA5Q96PV4 448 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 PHF12Q96QT6 1004 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 RIT2Q99578 217 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ARID3AQ99856 593 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 LPIN3Q9BQK8 851 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 UBAC1Q9BSL1 405 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 TASP1Q9H6P5 420 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 DCTPP1Q9H773 170 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 CYP4F11Q9HBI6 524 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 LRRC4CQ9HCJ2 640 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 ASAH2Q9NR71 780 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 DISC1Q9NRI5 854 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 TM7SF3Q9NS93 570 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 STARD5Q9NSY2 213 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 MMP17Q9ULZ9 603 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 INSL5Q9Y5Q6 135 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 NAV1Q8NEY1 1877 aa2.64□□□□□ -1.99
CPNE3-211ENST00000621526 SETD2Q9BYW2 2564 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ATMQ13315 3056 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 FNDC1Q4ZHG4 1894 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 DENND4AQ7Z401 1863 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 FBN3Q75N90 2809 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 RELNP78509 3460 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 C2CD3Q4AC94 2353 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ASCC3Q8N3C0 2202 aaKnown RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 IGLV3-22A0A075B6J6 115 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 A0A1B0GTW7 788 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 A0A1W2PRU2 124 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 FAM149AA5PLN7 773 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 OTOL1A6NHN0 477 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 WDR64B1ANS9 1081 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 FAM86B1E9PN63 330 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PYCARD-AS1I3L0S3 204 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 K7ENP7 123 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 K7EQS6 105 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ZBTB24O43167 697 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PAPSS1O43252 624 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ANP32CO43423 234 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 DXOO77932 396 aaKnown RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 B3GAT3O94766 335 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 OAZ2O95190 189 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CER1O95813 267 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 FAM86B2P0C5J1 330 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SRGAP2CP0DJJ0 459 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 RLBP1P12271 317 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 GJA1P17302 382 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ITGB6P18564 788 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 DDX6P26196 483 aaKnown RBP eCLIP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 CIITAP33076 1130 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 GRK6P43250 576 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TNFRSF4P43489 277 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ALDH1A3P47895 512 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 USP11P51784 963 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 JAK3P52333 1124 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 EPHB3P54753 998 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PTENP60484 403 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ERVPABLB-1P60509 514 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 HAND2P61296 217 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ASIC1P78348 528 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ROR1Q01973 937 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TARDBPQ13148 414 aaKnown RBP eCLIP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 AP3B2Q13367 1082 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 MXD4Q14582 209 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 ZNF268Q14587 947 aaPredicted RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 NOLC1Q14978 699 aaKnown RBP eCLIP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 SART3Q15020 963 aaKnown RBP2.63□□□□□ -1.99
CPNE3-211ENST00000621526 NAB2Q15742 525 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 UPP1Q16831 310 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 HLA-BQ31612 363 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 PLEKHG6Q3KR16 790 aa2.63□□□□□ -1.99
CPNE3-211ENST00000621526 TBC1D25Q3MII6 688 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms