RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 PIK3R5Q8WYR1 880 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 CPB2Q96IY4 423 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 MAML3Q96JK9 1138 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 NIF3L1Q9GZT8 377 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 XYLT2Q9H1B5 865 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 CISHQ9NSE2 258 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 ADAM22Q9P0K1 906 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 ADCY6O43306 1168 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 CELF2O95319 508 aaKnown RBP22.68■■□□□ 1.22
LIME1-210ENST00000621325 GJB6O95452 261 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 FLT3P36888 993 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 PHKA2P46019 1235 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 DR1Q01658 176 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 GRB14Q14449 540 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 SGSM1Q2NKQ1 1148 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 SEL1L2Q5TEA6 688 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 ZNF467Q7Z7K2 595 aaPredicted RBP22.68■■□□□ 1.22
LIME1-210ENST00000621325 EXOC4Q96A65 974 aa22.68■■□□□ 1.22
LIME1-210ENST00000621325 EMID1Q96A84 441 aaPredicted RBP22.68■■□□□ 1.22
LIME1-210ENST00000621325 MGAMO43451 1857 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 H3BRB1 525 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 HSF2BPO75031 334 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 MYBL1P10243 752 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 SURF1Q15526 300 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 IQCKQ8N0W5 287 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 MREGQ8N565 214 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 SEC14L1Q92503 715 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 NFKBIZQ9BYH8 718 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 TUT1Q9H6E5 874 aaKnown RBP22.67■■□□□ 1.22
LIME1-210ENST00000621325 B4GALT4O60513 344 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 NFICP08651 508 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 RWDD2BP57060 319 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 PTP4A2Q12974 167 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 ZNF699Q32M78 642 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 ALS2CLQ60I27 953 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 TTC27Q6P3X3 843 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 TRIM72Q6ZMU5 477 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 NPLOC4Q8TAT6 608 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 SH3GL2Q99962 352 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 PRMT7Q9NVM4 692 aaPredicted RBP22.67■■□□□ 1.22
LIME1-210ENST00000621325 POLIQ9UNA4 740 aa22.67■■□□□ 1.22
LIME1-210ENST00000621325 ASPAP45381 313 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 LMAN1P49257 510 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 ZSCAN26Q16670 478 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 SLC13A5Q86YT5 568 aaPredicted RBP22.66■■□□□ 1.22
LIME1-210ENST00000621325 PPP1R13LQ8WUF5 828 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 TRIM11Q96F44 468 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 RPF1Q9H9Y2 349 aaKnown RBP22.66■■□□□ 1.22
LIME1-210ENST00000621325 UTP11Q9Y3A2 253 aaKnown RBP22.66■■□□□ 1.22
LIME1-210ENST00000621325 MAGEB2O15479 319 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 PPFIA4O75335 1185 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 MAMLD1Q13495 774 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 MTHFD1LQ6UB35 978 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 PHF13Q86YI8 300 aaPredicted RBP22.66■■□□□ 1.22
LIME1-210ENST00000621325 EIF1ADQ8N9N8 165 aaKnown RBP22.66■■□□□ 1.22
LIME1-210ENST00000621325 ARL8AQ96BM9 186 aa22.66■■□□□ 1.22
LIME1-210ENST00000621325 NXF1Q9UBU9 619 aaKnown RBP22.66■■□□□ 1.22
LIME1-210ENST00000621325 MYO1FO00160 1098 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 O00370 1275 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 PHF2O75151 1096 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 TNNC2P02585 160 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 KRT19P08727 400 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 STAG3L1P0CL83 205 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 HSPA9P38646 679 aaKnown RBP22.65■■□□□ 1.22
LIME1-210ENST00000621325 MARCH8Q5T0T0 291 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 CFAP58Q5T655 872 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 MAGOHBQ96A72 148 aaKnown RBP22.65■■□□□ 1.22
LIME1-210ENST00000621325 TINF2Q9BSI4 451 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 PDZD7Q9H5P4 517 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 SIX4Q9UIU6 781 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 ANK1P16157 1881 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 LACTBL1A8MY62 500 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 KRT14P02533 472 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 RARAP10276 462 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 RAP1GAPP47736 663 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 SIX1Q15475 284 aaPredicted RBP22.65■■□□□ 1.22
LIME1-210ENST00000621325 PLEKHH3Q7Z736 793 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 JAMLQ86YT9 394 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 TFAP2BQ92481 460 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 ANKRD36BP1Q96IX9 119 aa22.65■■□□□ 1.22
LIME1-210ENST00000621325 PARK7Q99497 189 aaKnown RBP22.65■■□□□ 1.22
LIME1-210ENST00000621325 ARF4P18085 180 aaPredicted RBP22.64■■□□□ 1.21
LIME1-210ENST00000621325 PTGIRP43119 386 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 FKBP1BP68106 108 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 ACVR2BQ13705 512 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 CLUL1Q15846 466 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 DUSP28Q4G0W2 176 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 SRLQ86TD4 932 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 C2orf69Q8N8R5 385 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 RRAGCQ9HB90 399 aa22.64■■□□□ 1.21
LIME1-210ENST00000621325 MMP3P08254 477 aa22.63■■□□□ 1.21
LIME1-210ENST00000621325 PPFIA1Q13136 1202 aa22.63■■□□□ 1.21
LIME1-210ENST00000621325 FAM187BQ17R55 369 aa22.63■■□□□ 1.21
LIME1-210ENST00000621325 FAM110CQ1W6H9 321 aa22.63■■□□□ 1.21
LIME1-210ENST00000621325 LIN9Q5TKA1 542 aa22.63■■□□□ 1.21
LIME1-210ENST00000621325 C1orf127Q8N9H9 656 aa22.63■■□□□ 1.21
LIME1-210ENST00000621325 C1orf131Q8NDD1 294 aaKnown RBP22.63■■□□□ 1.21
LIME1-210ENST00000621325 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.63■■□□□ 1.215e-8■■■■■ 65.3
LIME1-210ENST00000621325 POU5F1BQ06416 359 aa22.63■■□□□ 1.21
LIME1-210ENST00000621325 GRIK4Q16099 956 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms