RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ENTPD3O75355 529 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 CYP11B1P15538 503 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 CHRNB2P17787 502 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 CD58P19256 250 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 DYNC1I2Q13409 638 aaKnown RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 MTMR2Q13614 643 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 MTERF2Q49AM1 385 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 CD302Q8IX05 232 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 LRRC34Q8IZ02 419 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 OLIG1Q8TAK6 271 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 SLC35B4Q969S0 331 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 MKNK1Q9BUB5 465 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 BARX2Q9UMQ3 279 aaPredicted RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 MYH11P35749 1972 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 A0A0A6YYK5 440 aaPredicted RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 KRT38O76015 456 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 CFHP08603 1231 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 ZBTB48P10074 688 aaPredicted RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 RRM1P23921 792 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 CAP2P40123 477 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 NPTX2P47972 431 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 PLCB3Q01970 1234 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 DMP1Q13316 513 aaPredicted RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 C1orf220Q5T0J3 134 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 ZDHHC24Q6UX98 284 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 BTNL9Q6UXG8 535 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 EEPD1Q7L9B9 569 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 TMEM143Q96AN5 459 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 NT5C1BQ96P26 610 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 XPO6Q96QU8 1125 aaKnown RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 TMEM206Q9H813 350 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 ECT2Q9H8V3 914 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 HERC5Q9UII4 1024 aaKnown RBP11.34□□□□□ -0.59
CDH1-214ENST00000621016 RIPK3Q9Y572 518 aa11.34□□□□□ -0.59
CDH1-214ENST00000621016 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
CDH1-214ENST00000621016 PHF2O75151 1096 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 CCNE2O96020 404 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 NQO1P15559 274 aaKnown RBP11.33□□□□□ -0.6
CDH1-214ENST00000621016 MFAP3P55082 362 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 KRT17Q04695 432 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 BAATQ14032 418 aaPredicted RBP11.33□□□□□ -0.6
CDH1-214ENST00000621016 RCN2Q14257 317 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 MUM1Q2TAK8 710 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 SYCP2LQ5T4T6 812 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 LRIG3Q6UXM1 1119 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 ZNF365Q70YC5 407 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 SV2AQ7L0J3 742 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 SIX5Q8N196 739 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 CCDC197Q8NCU1 140 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 ZFAND2BQ8WV99 257 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 BSNDQ8WZ55 320 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 KCNN1Q92952 543 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 CNKSR1Q969H4 720 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 HIC2Q96JB3 615 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 SIKE1Q9BRV8 207 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 PFDN4Q9NQP4 134 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 ADAM22Q9P0K1 906 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 HEY1Q9Y5J3 304 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 DNAJC8O75937 253 aaPredicted RBP11.33□□□□□ -0.6
CDH1-214ENST00000621016 ATF7P17544 494 aaPredicted RBP11.33□□□□□ -0.6
CDH1-214ENST00000621016 CHKAP35790 457 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 ATP11AP98196 1134 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 FMO1Q01740 532 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 POU5F1Q01860 360 aaKnown RBP11.33□□□□□ -0.6
CDH1-214ENST00000621016 KCTD21Q4G0X4 260 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 ATP13A4Q4VNC1 1196 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 SLC13A5Q86YT5 568 aaPredicted RBP11.33□□□□□ -0.6
CDH1-214ENST00000621016 CHMP6Q96FZ7 201 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 FNBP1Q96RU3 617 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 TCHPQ9BT92 498 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 ZDHHC18Q9NUE0 388 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
CDH1-214ENST00000621016 GOLGA8SH3BPF8 625 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 GOLGA8MH3BSY2 632 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 SPTLC1O15269 473 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 CCND1P24385 295 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 COILP38432 576 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 MLH1P40692 756 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 ZNF131P52739 623 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 BTG3Q14201 252 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 KRT39Q6A163 491 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 SCARA3Q6AZY7 606 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 DPH6Q7L8W6 267 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 NLRX1Q86UT6 975 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 ZC3H18Q86VM9 953 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 SYTL5Q8TDW5 730 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 ZBTB45Q96K62 511 aaPredicted RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 TUT1Q9H6E5 874 aaKnown RBP11.32□□□□□ -0.6
CDH1-214ENST00000621016 PNMA3Q9UL41 463 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 RPTORQ8N122 1335 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 SYNGAP1Q96PV0 1343 aa11.32□□□□□ -0.6
CDH1-214ENST00000621016 LRRIQ4A6NIV6 560 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms