RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PLGRKTQ9HBL7 147 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 BLOC1S4Q9NUP1 217 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 MAD2L2Q9UI95 211 aa10.96□□□□□ -0.66
VPS11-207ENST00000620429 TRAF5O00463 557 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 NOL4O94818 638 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 HSPA8P11142 646 aaKnown RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 CREB1P16220 341 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 NAA20P61599 178 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 KLHL30Q0D2K2 578 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 GRB10Q13322 594 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 MSLNQ13421 630 aaPredicted RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 KCTD19Q17RG1 926 aaPredicted RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 SBK1Q52WX2 424 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 TAF1BQ53T94 588 aaPredicted RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 PPP1R21Q6ZMI0 780 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 RGS9BPQ6ZS82 235 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 NEK8Q86SG6 692 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 GLIS3Q8NEA6 775 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 RIN3Q8TB24 985 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 C10orf82Q8WW14 230 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 GOLPH3Q9H4A6 298 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 CD209Q9NNX6 404 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 POLLQ9UGP5 575 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 FAF1Q9UNN5 650 aaPredicted RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 NRXN2Q9P2S2 1712 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 FUOMA2VDF0 154 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 IQCA1LA6NCM1 817 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 RASA4BC9J798 803 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 RASA4O43374 803 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 TRMUO75648 421 aaKnown RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 TFAP2AP05549 437 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 MYCLP1P12525 358 aaPredicted RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 RARGP13631 454 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 UQCRBP14927 111 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 ENDOUP21128 410 aaKnown RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 FOXN2P32314 431 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 DMPKQ09013 629 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 TGFBIQ15582 683 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 CRY2Q49AN0 593 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 ADGRG6Q86SQ4 1221 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 DGKHQ86XP1 1220 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 PDSS2Q86YH6 399 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 ARHGAP24Q8N264 748 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 FBXO25Q8TCJ0 367 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 USP33Q8TEY7 942 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 GIPC3Q8TF64 312 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 LARP4BQ92615 738 aaKnown RBP10.95□□□□□ -0.66
VPS11-207ENST00000620429 TRIM31Q9BZY9 425 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 CPVLQ9H3G5 476 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 PARVBQ9HBI1 364 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 KCNK9Q9NPC2 374 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 ZFP69BQ9UJL9 534 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 COL4A3BPQ9Y5P4 624 aa10.95□□□□□ -0.66
VPS11-207ENST00000620429 KIAA0391O15091 583 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 GAS8O95995 478 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 RAP1GDS1P52306 607 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 CHN2P52757 468 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PLTPP55058 493 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 XIAPP98170 497 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 DR1Q01658 176 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 ZBTB17Q13105 803 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 DHX34Q14147 1143 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 KIAA1755Q5JYT7 1200 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 IL23RQ5VWK5 629 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PRPF31Q8WWY3 499 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 KANSL2Q9H9L4 492 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 MLXIPLQ9NP71 852 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 NDE1Q9NXR1 346 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 RABL2AQ9UBK7 228 aaPredicted RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 MTRF1LQ9UGC7 380 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 PARP2Q9UGN5 583 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PRELID1Q9Y255 219 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 NOX1Q9Y5S8 564 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 A0A088AWK7 358 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 SMCO2A6NFE2 343 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 C2CD2LO14523 706 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 BUD23O43709 281 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 PHF2O75151 1096 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 EIF2S1P05198 315 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 BRAFP15056 766 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PTPN2P17706 415 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 COG7P83436 770 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 IL9RQ01113 521 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 THOC5Q13769 683 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 ASIC2Q16515 512 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 ZNF568Q3ZCX4 644 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 SNRNP48Q6IEG0 339 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 OR6Y1Q8NGX8 325 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 ZFP28Q8NHY6 868 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 ZNF398Q8TD17 642 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 TBCKQ8TEA7 893 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PYROXD1Q8WU10 500 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PTCD3Q96EY7 689 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 ZFRQ96KR1 1074 aaKnown RBP10.94□□□□□ -0.66
VPS11-207ENST00000620429 NSMCE3Q96MG7 304 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 PNMA5Q96PV4 448 aa10.94□□□□□ -0.66
VPS11-207ENST00000620429 NEURL2Q9BR09 285 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms