RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SLC45A4Q5BKX6 768 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 PRR5LQ6MZQ0 368 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 RBM44Q6ZP01 1051 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 CTAGE3PQ8IX95 158 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 USP6NLQ92738 828 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 YIPF2Q9BWQ6 316 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 INTS2Q9H0H0 1204 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 KIAA1586Q9HCI6 787 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 PHF24Q9UPV7 400 aa10.33□□□□□ -0.76
TNFAIP3-210ENST00000620204 SPDYE16A6NNV3 312 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PI4K2BG5E9Z4 385 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 RNASEH1O60930 286 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 STAMBPO95630 424 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 CALCAP01258 141 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PCP11498 1178 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 CDK7P50613 346 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 NR1H3Q13133 447 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 ACVR2BQ13705 512 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PDIA5Q14554 519 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PCNX4Q63HM2 1172 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 RIPOR1Q6ZS17 1223 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 TPH2Q8IWU9 490 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 GATA6Q92908 595 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 CCDC127Q96BQ5 260 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 RUSC1Q9BVN2 902 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 KCTD10Q9H3F6 313 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZNF212Q9UDV6 495 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 APPL1Q9UKG1 709 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 FCHO1O14526 889 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 CYP26A1O43174 497 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 COQ9O75208 318 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZSCAN5DPP0CG00 497 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 GYS1P13807 737 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 FMO5P49326 533 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PDIA2Q13087 525 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 CYLC2Q14093 348 aaPredicted RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 MAPK6Q16659 721 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 GRAMD4Q6IC98 578 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 TXNRD3Q86VQ6 643 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 SCUBE1Q8IWY4 988 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 RBM12BQ8IXT5 1001 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 C10orf82Q8WW14 230 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 GCNAQ96QF7 691 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 GRIP2Q9C0E4 1043 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 MANSC1Q9H8J5 431 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 HOMER2Q9NSB8 354 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 NEU2Q9Y3R4 380 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 MYH14Q7Z406 1995 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 ASMTLO95671 621 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 EYA4O95677 639 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PICALMQ13492 652 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 RASA2Q15283 850 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 EDRF1Q3B7T1 1238 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 RC3H1Q5TC82 1133 aaKnown RBP10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 GRK7Q8WTQ7 553 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 WNT8AQ9H1J5 351 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PSTPIP2Q9H939 334 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 PACSIN3Q9UKS6 424 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 SHANK3Q9BYB0 1731 aa10.32□□□□□ -0.76
TNFAIP3-210ENST00000620204 FAM237BA0A1B0GVD1 139 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 SPECC1L-ADORA2AF8WAN1 911 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 ADCY3O60266 1144 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 CD58P19256 250 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■□□□□ 10.5
TNFAIP3-210ENST00000620204 GPS1Q13098 491 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 FASTKD3Q14CZ7 662 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 PDK4Q16654 411 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 CBWD6Q4V339 395 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 PLEKHG4Q58EX7 1191 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 CBWD3Q5JTY5 395 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 CBWD5Q5RIA9 395 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 FAM182AQ5T1J6 154 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 LRRC8BQ6P9F7 803 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 PPP4R3CPQ6ZMV5 832 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 ALYREFQ86V81 257 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 TCP10LQ8TDR4 215 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 KAT5Q92993 513 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 PPP2R3CQ969Q6 453 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 MTMR9Q96QG7 549 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 ANLNQ9NQW6 1124 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 DOLKQ9UPQ8 538 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 ZNF804BA4D1E1 1349 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 MYH3P11055 1940 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 LOC100653049A0A140TA62 436 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 MED24O75448 989 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 KRT34O76011 436 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 PDE5AO76074 875 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 CDC16Q13042 620 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 CYTH1Q15438 398 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 TRABD2AQ86V40 505 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 PALM2Q8IXS6 379 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 CCDC89Q8N998 374 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 ERMNQ8TAM6 284 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 FAM111AQ96PZ2 611 aa10.31□□□□□ -0.76
TNFAIP3-210ENST00000620204 OSBPL8Q9BZF1 889 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms