RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 ICAM1P05362 532 aa16.77■□□□□ 0.27
SEMA3B-214ENST00000619119 POTEJP0CG39 1038 aa16.77■□□□□ 0.27
SEMA3B-214ENST00000619119 KLHL30Q0D2K2 578 aa16.77■□□□□ 0.27
SEMA3B-214ENST00000619119 MAN2A1Q16706 1144 aa16.77■□□□□ 0.27
SEMA3B-214ENST00000619119 SPDYCQ5MJ68 293 aa16.77■□□□□ 0.27
SEMA3B-214ENST00000619119 HYIQ5T013 277 aa16.77■□□□□ 0.27
SEMA3B-214ENST00000619119 IL31RAQ8NI17 732 aa16.77■□□□□ 0.27
SEMA3B-214ENST00000619119 TMEM110-MUSTN1A8MSY1 372 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 CES2O00748 559 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 WDR46O15213 610 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 GAS7O60861 476 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 BRAFP15056 766 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 RPA1P27694 616 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 SLC12A3P55017 1021 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 CDR2Q01850 454 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 AP1B1Q10567 949 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 CEP55Q53EZ4 464 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 PHLDB3Q6NSJ2 640 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 IZUMO2Q6UXV1 221 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 PDCD7Q8N8D1 485 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 CEP70Q8NHQ1 597 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 ABHD8Q96I13 439 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 NR1H4Q96RI1 486 aaPredicted RBP16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 ERP44Q9BS26 406 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 ZHX2Q9Y6X8 837 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 PSMG1O95456 288 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 CYP3A4P08684 503 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 KRT13P13646 458 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 GSTA3Q16772 222 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 KLC3Q6P597 504 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 ZDHHC24Q6UX98 284 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 CCDC65Q8IXS2 484 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 SLC15A3Q8IY34 581 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 GUF1Q8N442 669 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 MIPEPQ99797 713 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 ZNF577Q9BSK1 485 aa16.76■□□□□ 0.27
SEMA3B-214ENST00000619119 CCDC160A6NGH7 325 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 HOXD12P35452 270 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 HMGCS2P54868 508 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 PPP2R5CQ13362 524 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 DUPD1Q68J44 220 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 SATL1Q86VE3 508 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 NME8Q8N427 588 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 LSM14BQ9BX40 385 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 AIPL1Q9NZN9 384 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 SPDYE16A6NNV3 312 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 TRAF5O00463 557 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 MAPK13O15264 365 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 SH3BGRP55822 239 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 EXOC3L4Q17RC7 722 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 NSMFQ6X4W1 530 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 OTOP1Q7RTM1 612 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 SH3TC2Q8TF17 1288 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 REEP2Q9BRK0 252 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 SUCLA2Q9P2R7 463 aaPredicted RBP16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 RIPK2O43353 540 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 ACSL3O95573 720 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 EIF2AK2P19525 551 aaKnown RBP16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 CASP5P51878 434 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 PHEXP78562 749 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 SULT2A1Q06520 285 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 MAP7D1Q3KQU3 841 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 NANOGNBQ7Z5D8 188 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 SPOCK2Q92563 424 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 LPAR1Q92633 364 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 ATG4CQ96DT6 458 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
SEMA3B-214ENST00000619119 LSM1O15116 133 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 FOXN2P32314 431 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 KCNN1Q92952 543 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 RUSC1Q9BVN2 902 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 ERVK-5Q9HDB9 667 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 DNAJC17Q9NVM6 304 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 PFASO15067 1338 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 HIRAP54198 1017 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 POU5F1Q01860 360 aaKnown RBP16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 ACVR2BQ13705 512 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 TAF1BQ53T94 588 aaPredicted RBP16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 CROCCP2Q86T23 111 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 JAMLQ86YT9 394 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 TBK1Q9UHD2 729 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 RABGAP1Q9Y3P9 1069 aa16.74■□□□□ 0.27
SEMA3B-214ENST00000619119 PLA2G6O60733 806 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 RNASEH1O60930 286 aaKnown RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 MYCLP12524 364 aaPredicted RBP16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 ITGB5P18084 799 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 NAT1P18440 290 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 TAC1P20366 129 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 PTPN4P29074 926 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 PPP1R2P41236 205 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 DCAF15Q66K64 600 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 TMEM53Q6P2H8 277 aa16.73■□□□□ 0.27
SEMA3B-214ENST00000619119 SFR1Q86XK3 245 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms