RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 FMO5P49326 533 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 ADCY1Q08828 1119 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 NFIL3Q16649 462 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 WDR72Q3MJ13 1102 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 C6orf163Q5TEZ5 329 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 FAM186BQ8IYM0 893 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
UPF3A-212ENST00000619079 PPP2R3CQ969Q6 453 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 RIOX1Q9H6W3 641 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 TDRD3Q9H7E2 651 aaKnown RBP11.45□□□□□ -0.58
UPF3A-212ENST00000619079 PREBQ9HCU5 417 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 KRT82Q9NSB4 513 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 TBC1D30Q9Y2I9 924 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 MAST2Q6P0Q8 1798 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 ASTN1O14525 1302 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 SMIM31A0A1B0GVY4 71 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 EXOC1LA0A1B0GW35 172 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 POTEB3A0JP26 581 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 EDIL3O43854 480 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 DNAJC6O75061 913 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 FAM200BP0CF97 657 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 CA4P22748 312 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 IVDP26440 423 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 ADCY8P40145 1251 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 KRT72Q14CN4 511 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 ARSHQ5FYA8 562 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 POTEBQ6S5H4 581 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 OTOAQ7RTW8 1153 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 SFR1Q86XK3 245 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 SCYL3Q8IZE3 742 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 MRIQ9BWK5 157 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 GPR88Q9GZN0 384 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 INTS2Q9H0H0 1204 aaKnown RBP11.45□□□□□ -0.58
UPF3A-212ENST00000619079 CPVLQ9H3G5 476 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 SSU72Q9NP77 194 aaKnown RBP11.45□□□□□ -0.58
UPF3A-212ENST00000619079 METTL5Q9NRN9 209 aaKnown RBP11.45□□□□□ -0.58
UPF3A-212ENST00000619079 GGA3Q9NZ52 723 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
UPF3A-212ENST00000619079 SPAG7O75391 227 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 DLATP10515 647 aaKnown RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 HOXD13P35453 343 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 CETN2P41208 172 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 CASP4P49662 377 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 RAP1GDS1P52306 607 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 HIRAP54198 1017 aaPredicted RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 RTP1P59025 263 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 RASA2Q15283 850 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 ANGEL2Q5VTE6 544 aaKnown RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 CCDC89Q8N998 374 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 DCPSQ96C86 337 aaKnown RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 DYNLL2Q96FJ2 89 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 VAT1LQ9HCJ6 419 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 NPHS2Q9NP85 383 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 SCAF8Q9UPN6 1271 aaKnown RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 PFDN1O60925 122 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 ZCCHC18P0CG32 403 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 KRT15P19012 456 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 CRABP2P29373 138 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 CACNB3P54284 484 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 ZC2HC1CQ53FD0 456 aaPredicted RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 USP17L2Q6R6M4 530 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 ACAD11Q709F0 780 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 PIP4K2CQ8TBX8 421 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 DTX3LQ8TDB6 740 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 NAT14Q8WUY8 206 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 ZNF75CPQ92670 426 aaPredicted RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 LENG1Q96BZ8 264 aaPredicted RBP11.44□□□□□ -0.58
UPF3A-212ENST00000619079 ECSITQ9BQ95 431 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 TRIM55Q9BYV6 548 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 OSBPL8Q9BZF1 889 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 EPB41L1Q9H4G0 881 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 NDE1Q9NXR1 346 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 BLOC1S6Q9UL45 172 aa11.44□□□□□ -0.58
UPF3A-212ENST00000619079 GAKO14976 1311 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 ASTN2O75129 1339 aaPredicted RBP11.43□□□□□ -0.58
UPF3A-212ENST00000619079 ATP9BO43861 1147 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 MAGEC1O60732 1142 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 TBCAO75347 108 aaKnown RBP11.43□□□□□ -0.58
UPF3A-212ENST00000619079 ESRRAP11474 423 aaPredicted RBP11.43□□□□□ -0.58
UPF3A-212ENST00000619079 GZMAP12544 262 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 CHRNB2P17787 502 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 AP2B1P63010 937 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 ITGA9Q13797 1035 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 TRMT5Q32P41 509 aaKnown RBP11.43□□□□□ -0.58
UPF3A-212ENST00000619079 TMEM259Q4ZIN3 620 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 IZUMO2Q6UXV1 221 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 PALB2Q86YC2 1186 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 KBTBD2Q8IY47 623 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 SLFN12Q8IYM2 578 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 SYT2Q8N9I0 419 aaPredicted RBP11.43□□□□□ -0.58
UPF3A-212ENST00000619079 MTMR14Q8NCE2 650 aa11.43□□□□□ -0.58
UPF3A-212ENST00000619079 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
UPF3A-212ENST00000619079 TUBGCP5Q96RT8 1024 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms