RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PCSK1P29120 753 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 SLC8A1P32418 973 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 DHX34Q14147 1143 aaKnown RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 UGCGQ16739 394 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 ARSHQ5FYA8 562 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 C1orf131Q8NDD1 294 aaKnown RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 UBA3Q8TBC4 463 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 DNAJB3Q8WWF6 145 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 CLEC4DQ8WXI8 215 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 ZBTB45Q96K62 511 aaPredicted RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 PRDM5Q9NQX1 630 aaPredicted RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 AIPL1Q9NZN9 384 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 COL20A1Q9P218 1284 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 SNCAIPQ9Y6H5 919 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 TARSL2A2RTX5 802 aaKnown RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 RPLP2P05387 115 aaKnown RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 MCF2P10911 925 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 MSH2P43246 934 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 SPOPLQ6IQ16 392 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 SPATA2LQ8IUW3 424 aaPredicted RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 TPCN2Q8NHX9 752 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 MTG1Q9BT17 334 aaPredicted RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 KLHL11Q9NVR0 708 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 NWD2Q9ULI1 1742 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 EXOC1LA0A1B0GW35 172 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 LYPLA2O95372 231 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 SETSIPP0DME0 302 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 PDE1BQ01064 536 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 NNTQ13423 1086 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 PHLDB3Q6NSJ2 640 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 RCOR2Q8IZ40 523 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 ASAP3Q8TDY4 903 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 C12orf42Q96LP6 360 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 TRIM62Q9BVG3 475 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 TTC7AQ9ULT0 858 aaPredicted RBP14.66□□□□□ -0.06
CIITA-213ENST00000618327 GLRA2P23416 452 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 CAV1Q03135 178 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 BTBD8Q5XKL5 378 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 ANO5Q75V66 913 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 TMEM161BQ8NDZ6 487 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 MED15Q96RN5 788 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 PACSIN1Q9BY11 444 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 KLHL14Q9P2G3 628 aa14.66□□□□□ -0.06
CIITA-213ENST00000618327 ASTN1O14525 1302 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 GZMAP12544 262 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 PEX19P40855 299 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 GARSP41250 739 aaKnown RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 ARRDC4Q8NCT1 418 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 GCNAQ96QF7 691 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 SAYSD1Q9NPB0 183 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 INTS9Q9NV88 658 aaKnown RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 ITGB4P16144 1822 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 IGLV3-22A0A075B6J6 115 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 GRIK1P39086 918 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 FSCN1Q16658 493 aaKnown RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 MUM1Q2TAK8 710 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 COBLL1Q53SF7 1204 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 NOL9Q5SY16 702 aaKnown RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 LRRC31Q6UY01 552 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 FEZF2Q8TBJ5 459 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 TATDN2Q93075 761 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 IPO11Q9UI26 975 aaKnown RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 ADAMTS3O15072 1205 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 PSEN2P49810 448 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 ARL4CP56559 192 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 PLCB4Q15147 1175 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 SLC35G1Q2M3R5 365 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 GOLGA7BQ2TAP0 167 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 SMARCAL1Q9NZC9 954 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 KLHL8Q9P2G9 620 aaPredicted RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 TBK1Q9UHD2 729 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 MAGED2Q9UNF1 606 aaPredicted RBP14.65□□□□□ -0.06
CIITA-213ENST00000618327 CAPN6Q9Y6Q1 641 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 CRCPO75575 148 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 GRAP2O75791 330 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 KRT14P02533 472 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 SKIP12755 728 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 TMED2Q15363 201 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 TAF2Q6P1X5 1199 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 PLPPR4Q7Z2D5 763 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 PCGF5Q86SE9 256 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 SLC47A2Q86VL8 602 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 BRSK2Q8IWQ3 736 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 TMEM134Q9H6X4 195 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 INTS13Q9NVM9 706 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 PLAAQ9Y263 795 aa14.65□□□□□ -0.06
CIITA-213ENST00000618327 CCNE2O96020 404 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 SAT1P21673 171 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 CCT5P48643 541 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 VSNL1P62760 191 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 JAG1P78504 1218 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 MAP2K5Q13163 448 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 CBWD6Q4V339 395 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 CBWD3Q5JTY5 395 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 CBWD5Q5RIA9 395 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 AP1ARQ63HQ0 302 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 ZNF410Q86VK4 478 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
CIITA-213ENST00000618327 CISHQ9NSE2 258 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms