RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 C1orf186Q6ZWK4 172 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 PALB2Q86YC2 1186 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 DAW1Q8N136 415 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 CCDC89Q8N998 374 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 GIPC2Q8TF65 315 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
SRRT-216ENST00000618262 XPNPEP1Q9NQW7 623 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 KRT82Q9NSB4 513 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 PCMTD2Q9NV79 361 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 TMCO1Q9UM00 188 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 R3HDM2Q9Y2K5 976 aaKnown RBP12.84□□□□□ -0.35
SRRT-216ENST00000618262 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 PQBP1O60828 265 aaKnown RBP12.84□□□□□ -0.35
SRRT-216ENST00000618262 GCNT3O95395 438 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 CYP2C9P11712 490 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 ACLYP53396 1101 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 UBASH3AP57075 661 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 BLMHQ13867 455 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 EMC2Q15006 297 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 RUFY4Q6ZNE9 571 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 RNF180Q86T96 592 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 LUZP1Q86V48 1076 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 GRAMD2AQ8IUY3 354 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 GBP3Q9H0R5 595 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 TRPV6Q9H1D0 765 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 POLR3FQ9H1D9 316 aaPredicted RBP12.84□□□□□ -0.35
SRRT-216ENST00000618262 NRBP2Q9NSY0 501 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 FAM237AA0A1B0GTK4 181 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 PSEN2P49810 448 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 COASYQ13057 564 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 WNT8BQ93098 351 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 SNX27Q96L92 541 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 ZFATQ9P243 1243 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 STK17AQ9UEE5 414 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 GNRH1P01148 92 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 PRLRP16471 622 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 EN2P19622 333 aaPredicted RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 POLD2P49005 469 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 CYB5D1Q6P9G0 228 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 SH3RF1Q7Z6J0 888 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 PRPF31Q8WWY3 499 aaKnown RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 SRPK1Q96SB4 655 aaKnown RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 RNF19AQ9NV58 838 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 WDR35Q9P2L0 1181 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 KLRC4O43908 158 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 PHACTR2O75167 634 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 SKIV2L2P42285 1042 aaKnown RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 ZNF75DP51815 510 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 SNX16P57768 344 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 GJA9P57773 515 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 MKRN4PQ13434 485 aaPredicted RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 GDF6Q6KF10 455 aaPredicted RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 FBXO46Q6PJ61 603 aaPredicted RBP12.83□□□□□ -0.36
SRRT-216ENST00000618262 MSANTD4Q8NCY6 345 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 ASAP3Q8TDY4 903 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 ABHD8Q96I13 439 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 CARD6Q9BX69 1037 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 OSBPL7Q9BZF2 842 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 CDHR5Q9HBB8 845 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 RHBDL2Q9NX52 303 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
SRRT-216ENST00000618262 TTC34A8MYJ7 566 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
SRRT-216ENST00000618262 PFDN1O60925 122 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 ZNF254O75437 659 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 SUPT3HO75486 399 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 KRT14P02533 472 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 BEND6Q5SZJ8 279 aaPredicted RBP12.82□□□□□ -0.36
SRRT-216ENST00000618262 HYIQ5T013 277 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 MARCH8Q5T0T0 291 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 BCAS4Q8TDM0 211 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 HNRNPLLQ8WVV9 542 aaKnown RBP12.82□□□□□ -0.36
SRRT-216ENST00000618262 IPCEF1Q8WWN9 437 aaPredicted RBP12.82□□□□□ -0.36
SRRT-216ENST00000618262 PPP2R3CQ969Q6 453 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 STARD7Q9NQZ5 370 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 KIAA1257Q9ULG3 409 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 CTNND2Q9UQB3 1225 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 MYH9P35579 1960 aaKnown RBP12.82□□□□□ -0.36
SRRT-216ENST00000618262 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 RASA4O43374 803 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 KCNJ13O60928 360 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 F2P00734 622 aa12.82□□□□□ -0.36
SRRT-216ENST00000618262 PCNAP12004 261 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms