RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 PEX5P50542 639 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 MESDQ14696 234 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 GRIK4Q16099 956 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 GLE1Q53GS7 698 aaKnown RBP18.71■□□□□ 0.59
CNOT3-209ENST00000617930 CPB2Q96IY4 423 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 XYLT2Q9H1B5 865 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 SETD4Q9NVD3 440 aa18.71■□□□□ 0.59
CNOT3-209ENST00000617930 TULP2O00295 520 aa18.7■□□□□ 0.58
CNOT3-209ENST00000617930 CXCL8P10145 99 aa18.7■□□□□ 0.58
CNOT3-209ENST00000617930 CARSP49589 748 aaKnown RBP18.7■□□□□ 0.58
CNOT3-209ENST00000617930 ZNF132P52740 706 aa18.7■□□□□ 0.58
CNOT3-209ENST00000617930 CACNB2Q08289 660 aaPredicted RBP18.7■□□□□ 0.58
CNOT3-209ENST00000617930 MCOLN2Q8IZK6 566 aa18.7■□□□□ 0.58
CNOT3-209ENST00000617930 ZDHHC14Q8IZN3 488 aa18.7■□□□□ 0.58
CNOT3-209ENST00000617930 ZNF564Q8TBZ8 553 aaPredicted RBP18.7■□□□□ 0.58
CNOT3-209ENST00000617930 FAM81BQ96LP2 452 aa18.7■□□□□ 0.58
CNOT3-209ENST00000617930 TTC7AQ9ULT0 858 aaPredicted RBP18.7■□□□□ 0.58
CNOT3-209ENST00000617930 KAT6AQ92794 2004 aa18.7■□□□□ 0.58
CNOT3-209ENST00000617930 HEXIM1O94992 359 aaKnown RBP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 GGCXP38435 758 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 TFAMQ00059 246 aaKnown RBP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 POU5F1BQ06416 359 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 PPFIA1Q13136 1202 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 FAM187BQ17R55 369 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 NAA35Q5VZE5 725 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 IFNLR1Q8IU57 520 aaPredicted RBP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 PASD1Q8IV76 773 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 KIAA0319LQ8IZA0 1049 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 RBBP8NLQ8NC74 664 aaPredicted RBP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 CASKIN2Q8WXE0 1202 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 DDX47Q9H0S4 455 aaKnown RBP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 PDZD7Q9H5P4 517 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 CNOT8Q9UFF9 292 aaKnown RBP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 GOLGA6BA6NDN3 693 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 BHMG1C9JSJ3 638 aaPredicted RBP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 HAS3O00219 553 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 B4GALT4O60513 344 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 RPS6KA5O75582 802 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 FGGP02679 453 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 RRM1P23921 792 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 GUCY2DQ02846 1103 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 DUOXA2Q1HG44 320 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 SND1Q7KZF4 910 aaKnown RBP eCLIP18.69■□□□□ 0.58
CNOT3-209ENST00000617930 CXorf38Q8TB03 319 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 EPB41L5Q9HCM4 733 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 ERVK-5Q9HDB9 667 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 SIX4Q9UIU6 781 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 AKT3Q9Y243 479 aa18.69■□□□□ 0.58
CNOT3-209ENST00000617930 CEP350Q5VT06 3117 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 COL1A2P08123 1366 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 KRIT1O00522 736 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 MAGEB2O15479 319 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 SART1O43290 800 aaKnown RBP18.68■□□□□ 0.58
CNOT3-209ENST00000617930 FAM153BP0C7A2 387 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 AKR1A1P14550 325 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 ARF4P18085 180 aaPredicted RBP18.68■□□□□ 0.58
CNOT3-209ENST00000617930 TNFRSF8P28908 595 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 CCND3P30281 292 aaPredicted RBP18.68■□□□□ 0.58
CNOT3-209ENST00000617930 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
CNOT3-209ENST00000617930 POU5F1Q01860 360 aaKnown RBP18.68■□□□□ 0.58
CNOT3-209ENST00000617930 CENPCQ03188 943 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 FAM153CQ494X1 144 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 MON1BQ7L1V2 547 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 RIN2Q8WYP3 895 aaPredicted RBP18.68■□□□□ 0.58
CNOT3-209ENST00000617930 RNPC3Q96LT9 517 aaKnown RBP18.68■□□□□ 0.58
CNOT3-209ENST00000617930 TSPYL1Q9H0U9 437 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 CARD9Q9H257 536 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 FAM153AQ9UHL3 310 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 MROH7Q68CQ1 1323 aa18.68■□□□□ 0.58
CNOT3-209ENST00000617930 NFICP08651 508 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 SMIM10L2AP0DMW4 78 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 SMIM10L2BP0DMW5 78 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 GNA15P30679 374 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 AP3M2P53677 418 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 PTP4A2Q12974 167 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 ADAT2Q7Z6V5 191 aaKnown RBP18.67■□□□□ 0.58
CNOT3-209ENST00000617930 ZNF677Q86XU0 584 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 CALR3Q96L12 384 aaKnown RBP18.67■□□□□ 0.58
CNOT3-209ENST00000617930 RPS6KC1Q96S38 1066 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 CXCL16Q9H2A7 254 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 PRMT7Q9NVM4 692 aaPredicted RBP18.67■□□□□ 0.58
CNOT3-209ENST00000617930 LACTBL1A8MY62 500 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 PGK1P00558 417 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 MYL3P08590 195 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 WEE2P0C1S8 567 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 STAG3L1P0CL83 205 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 FGFR4P22455 802 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 TBXAS1P24557 533 aaPredicted RBP18.67■□□□□ 0.58
CNOT3-209ENST00000617930 ASPAP45381 313 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 PHKA2P46019 1235 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 NOMO3P69849 1222 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 ADAM17P78536 824 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 RUFY4Q6ZNE9 571 aa18.67■□□□□ 0.58
CNOT3-209ENST00000617930 AGPSO00116 658 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 PYGMP11217 842 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 CD58P19256 250 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 ECHS1P30084 290 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 EPHB4P54760 987 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 BPIFB4P59827 614 aa18.66■□□□□ 0.58
CNOT3-209ENST00000617930 PURAQ00577 322 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms