RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 LAIR1Q6GTX8 287 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 APBB1IPQ7Z5R6 666 aaPredicted RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 CELF5Q8N6W0 485 aaKnown RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 ZNF513Q8N8E2 541 aaPredicted RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 PIGOQ8TEQ8 1089 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 FAM3CQ92520 227 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 ELSPBP1Q96BH3 223 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 TRMT61BQ9BVS5 477 aaKnown RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 CHRDQ9H2X0 955 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 PDZD7Q9H5P4 517 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 ZFP14Q9HCL3 533 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 FAM13BQ9NYF5 915 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 LRWD1Q9UFC0 647 aa9.35□□□□□ -0.91
GPC6-202ENST00000617456 RALYQ9UKM9 306 aaKnown RBP9.35□□□□□ -0.91
GPC6-202ENST00000617456 CHURC1-FNTBB4DL54 471 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 ACKR2O00590 384 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 WNT7AO00755 349 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 NRG2O14511 850 aaPredicted RBP9.34□□□□□ -0.91
GPC6-202ENST00000617456 GDF9O60383 454 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 MED24O75448 989 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 RETP07949 1114 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 PTPN2P17706 415 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 FCARP24071 287 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 GDI1P31150 447 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 BRCC3P46736 316 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 CXCL12P48061 93 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 FNTBP49356 437 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 CCR3P51677 355 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 DMWDQ09019 674 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 PRPF4BQ13523 1007 aaKnown RBP9.34□□□□□ -0.91
GPC6-202ENST00000617456 NAB2Q15742 525 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 MAPK6Q16659 721 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 ARL6IP4Q66PJ3 421 aaKnown RBP9.34□□□□□ -0.91
GPC6-202ENST00000617456 HEATR6Q6AI08 1181 aaKnown RBP9.34□□□□□ -0.91
GPC6-202ENST00000617456 PADI6Q6TGC4 694 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 RTL10Q7L3V2 364 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
GPC6-202ENST00000617456 ZNF687Q8N1G0 1237 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 DNASE1L2Q92874 299 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 KCNN1Q92952 543 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 DDX27Q96GQ7 796 aaKnown RBP9.34□□□□□ -0.91
GPC6-202ENST00000617456 IFT74Q96LB3 600 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 ADPGKQ9BRR6 497 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 NTPCRQ9BSD7 190 aaKnown RBP9.34□□□□□ -0.91
GPC6-202ENST00000617456 GOLGA2P5Q9HBQ8 144 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 SEMA4GQ9NTN9 838 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 KCND2Q9NZV8 630 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 PAXBP1Q9Y5B6 917 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 BACE2Q9Y5Z0 518 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 PIAS3Q9Y6X2 628 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 VWA8A3KMH1 1905 aa9.34□□□□□ -0.91
GPC6-202ENST00000617456 ARID2Q68CP9 1835 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 CEP295Q9C0D2 2601 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ARHGEF35A5YM69 484 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ZNF197O14709 1029 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 HRO43593 1189 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 PRKCBP05771 671 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 GJA1P17302 382 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 CCNE1P24864 410 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 VIPR2P41587 438 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 CLCNKBP51801 687 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ROR1Q01973 937 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 PTGDRQ13258 359 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ZNF174Q15697 407 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 PRSS36Q5K4E3 855 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 KRT79Q5XKE5 535 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 EEF1DP3Q658K8 133 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 VITQ6UXI7 678 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 PRR23CQ6ZRP0 262 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ANKS3Q6ZW76 656 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 PDZD4Q76G19 769 aaPredicted RBP9.33□□□□□ -0.92
GPC6-202ENST00000617456 ARMCX6Q7L4S7 300 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 IRF7Q92985 503 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ZSWIM3Q96MP5 696 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 BACH2Q9BYV9 841 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 TMEM134Q9H6X4 195 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 CYP4F11Q9HBI6 524 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ZNF334Q9HCZ1 680 aaPredicted RBP9.33□□□□□ -0.92
GPC6-202ENST00000617456 DNM3Q9UQ16 869 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ATRXP46100 2492 aa9.33□□□□□ -0.92
GPC6-202ENST00000617456 ARHGEF37A1IGU5 675 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 WDR27A2RRH5 827 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 TMEM189-UBE2V1I3L0A0 370 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 ZNF263O14978 683 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 TRAPPC3O43617 180 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 LRP3O75074 770 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 SEC24AO95486 1093 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 BMP15O95972 392 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 EDN1P05305 212 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 MYL4P12829 197 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 CCT6AP40227 531 aaKnown RBP9.32□□□□□ -0.92
GPC6-202ENST00000617456 CCR2P41597 374 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 TOB1P50616 345 aaPredicted RBP9.32□□□□□ -0.92
GPC6-202ENST00000617456 GUCY1B3Q02153 619 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 CSRP2Q16527 193 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 DCAF4L1Q3SXM0 396 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 HYIQ5T013 277 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 CYP4A22Q5TCH4 519 aa9.32□□□□□ -0.92
GPC6-202ENST00000617456 ICE2Q659A1 982 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms