RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 AASDHQ4L235 1098 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 LRRN4CLQ8ND94 238 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 INPP5DQ92835 1189 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 CNBD2Q96M20 576 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 FAM118BQ9BPY3 351 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 FEM1BQ9UK73 627 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 BCS1LQ9Y276 419 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 TRIM49D1C9J1S8 452 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 FSBPO95073 299 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 MYBP10242 640 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 CLK1P49759 484 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 STXBP2Q15833 593 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 SWSAP1Q6NVH7 229 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 NSUN6Q8TEA1 469 aaKnown RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 PIK3R5Q8WYR1 880 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 VPS33BQ9H267 617 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 TASP1Q9H6P5 420 aa11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
CLTCL1-209ENST00000617103 NEO1Q92859 1461 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 CLPTM1O96005 669 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 PDGFRAP16234 1089 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 CCDC15Q0P6D6 951 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 DMC1Q14565 340 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 USP10Q14694 798 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 BEST2Q8NFU1 509 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 FAM111AQ96PZ2 611 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 CD209Q9NNX6 404 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 CST8O60676 142 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 FKBP6O75344 327 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 SKAP2O75563 359 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 RALAP11233 206 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 CACNA2D1P54289 1103 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 NPEPPSP55786 919 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 GPR141Q7Z602 305 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 MICU2Q8IYU8 434 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 SPATA18Q8TC71 538 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 MCEEQ96PE7 176 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 EGFL8Q99944 293 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 SARS2Q9NP81 518 aaKnown RBP11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 AIPL1Q9NZN9 384 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 WHRNQ9P202 907 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 MAD2L2Q9UI95 211 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 WASHC2DQ5SRD0 308 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 C6orf10Q5SRN2 563 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 SENP2Q9HC62 589 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 LRCH1Q9Y2L9 728 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 LMTK3Q96Q04 1460 aa11.16□□□□□ -0.62
CLTCL1-209ENST00000617103 MAP2K7O14733 419 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 EIF3DO15371 548 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 PAX7P23759 505 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 RUNX1T1Q06455 604 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 SNRNP35Q16560 246 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 FAM196AQ6ZSG2 479 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 LRRC6Q86X45 466 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 CNDP1Q96KN2 507 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 GPR101Q96P66 508 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 THAP2Q9H0W7 228 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 RSAD1Q9HA92 442 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ZNF302Q9NR11 478 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ZNF212Q9UDV6 495 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 UBA6A0AVT1 1052 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 C3orf70A6NLC5 250 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ATP9AO75110 1047 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 STX5Q13190 355 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 Q3C1V9 767 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 SBK1Q52WX2 424 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 FOXR1Q6PIV2 292 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ZNF512BQ96KM6 892 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 PCDHA10Q9Y5I2 948 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 F8VZ95 297 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ALBP02768 609 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 PSMC3P17980 439 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 VCAM1P19320 739 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 CACNB3P54284 484 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 TRMT5Q32P41 509 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 TTI2Q6NXR4 508 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 IZUMO2Q6UXV1 221 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 PATL1Q86TB9 770 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 KRT35Q92764 455 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 MAP3K14Q99558 947 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 AP5M1Q9H0R1 490 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 CDC42EP4Q9H3Q1 356 aaKnown RBP11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 SCN3BQ9NY72 215 aa11.15□□□□□ -0.62
CLTCL1-209ENST00000617103 ZBTB24O43167 697 aaPredicted RBP11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 NFKBIAP25963 317 aa11.15□□□□□ -0.63
CLTCL1-209ENST00000617103 NUDT2P50583 147 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms