RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 MARSP56192 900 aaKnown RBP11.63□□□□□ -0.55
COL4A1-205ENST00000615732 NFIL3Q16649 462 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 ZC2HC1CQ53FD0 456 aaPredicted RBP11.63□□□□□ -0.55
COL4A1-205ENST00000615732 CYP26C1Q6V0L0 522 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 TMTC1Q8IUR5 882 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 SMG8Q8ND04 991 aaKnown RBP11.63□□□□□ -0.55
COL4A1-205ENST00000615732 NEK11Q8NG66 645 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 KIFAP3Q92845 792 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 PPP1R13BQ96KQ4 1090 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 FAM193BQ96PV7 902 aaPredicted RBP11.63□□□□□ -0.55
COL4A1-205ENST00000615732 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 MMRN2Q9H8L6 949 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 SFXN1Q9H9B4 322 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 XPNPEP1Q9NQW7 623 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 ABHD10Q9NUJ1 306 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 MARCH5Q9NX47 278 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 CAPN11Q9UMQ6 739 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 EXOC7Q9UPT5 735 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 FRMD4BQ9Y2L6 1034 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 R3HCC1Q9Y3T6 440 aaKnown RBP11.63□□□□□ -0.55
COL4A1-205ENST00000615732 IPPQ9Y573 584 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 IRAK3Q9Y616 596 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 C2orf16Q68DN1 1984 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 ARID2Q68CP9 1835 aa11.63□□□□□ -0.55
COL4A1-205ENST00000615732 CNTNAP2Q9UHC6 1331 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 TTC26A0AVF1 554 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 USP27XA6NNY8 438 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 NRP1O14786 923 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 TSPAN1O60635 241 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 URODP06132 367 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 KLRC2P26717 231 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 HOXD13P35453 343 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 PSMC2P35998 433 aaKnown RBP11.62□□□□□ -0.55
COL4A1-205ENST00000615732 SCNN1GP51170 649 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 CLCN4P51793 760 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 PEX3P56589 373 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 DCAF17Q5H9S7 520 aaPredicted RBP11.62□□□□□ -0.55
COL4A1-205ENST00000615732 FIGNQ5HY92 759 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 ATAT1Q5SQI0 421 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 E4F1Q66K89 784 aaPredicted RBP11.62□□□□□ -0.55
COL4A1-205ENST00000615732 CCDC149Q6ZUS6 474 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 TAS1R1Q7RTX1 841 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 SRGAP1Q7Z6B7 1085 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 CDR2LQ86X02 465 aaPredicted RBP11.62□□□□□ -0.55
COL4A1-205ENST00000615732 TMEM139Q8IV31 216 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 TRIM59Q8IWR1 403 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 DAW1Q8N136 415 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 FLCNQ8NFG4 579 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 OR8K1Q8NGG5 319 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 ASAP3Q8TDY4 903 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 RSPH1Q8WYR4 309 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 B3GALT6Q96L58 329 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 IFT74Q96LB3 600 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 KLHL5Q96PQ7 755 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 FIZ1Q96SL8 496 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 GAD1Q99259 594 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 HERC2P3Q9BVR0 1158 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 LSM14BQ9BX40 385 aaKnown RBP11.62□□□□□ -0.55
COL4A1-205ENST00000615732 EMILIN2Q9BXX0 1053 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 MFSD1Q9H3U5 465 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 NXF3Q9H4D5 531 aaKnown RBP11.62□□□□□ -0.55
COL4A1-205ENST00000615732 MAN1C1Q9NR34 630 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
COL4A1-205ENST00000615732 USTQ9Y2C2 406 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 FAN1Q9Y2M0 1017 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 ZMYM2Q9UBW7 1377 aa11.62□□□□□ -0.55
COL4A1-205ENST00000615732 A0A1W2PQJ5 194 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 SOWAHDA6NJG2 315 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 H0YCG3 227 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 INO80B-WBP1J3KQ70 363 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 SLC16A4O15374 487 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 B4GALT5O43286 388 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 TGFB1I1O43294 461 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 PI15O43692 258 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 PPP1R37O75864 691 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 AFPP02771 609 aaKnown RBP11.61□□□□□ -0.55
COL4A1-205ENST00000615732 CCDC175P0C221 793 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 ITGA4P13612 1032 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 NPR3P17342 541 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 OR1G1P47890 313 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 KLK7P49862 253 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 CYP2J2P51589 502 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 CLCN5P51795 746 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 NCKAP1LP55160 1127 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 ZBED6P86452 979 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 FOXK2Q01167 660 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 KCNA1Q09470 495 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 CAPSQ13938 189 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 MYBPC2Q14324 1141 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 TCERG1LQ5VWI1 586 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 CACNA2D4Q7Z3S7 1137 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 MRPL10Q7Z7H8 261 aaKnown RBP11.61□□□□□ -0.55
COL4A1-205ENST00000615732 FAM186BQ8IYM0 893 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 TCP11Q8WWU5 503 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 RABGGTAQ92696 567 aa11.61□□□□□ -0.55
COL4A1-205ENST00000615732 TMEM175Q9BSA9 504 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms