RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TMEM8AQ9HCN3 771 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 LSM7Q9UK45 103 aaKnown RBP18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 ITM2BQ9Y287 266 aa18.25■□□□□ 0.51
HMGXB3-206ENST00000613459 ATP9BO43861 1147 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 MYL2P10916 166 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 NMT1P30419 496 aaKnown RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 PMS1P54277 932 aaKnown RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 RNF149Q8NC42 400 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 RBBP8NLQ8NC74 664 aaPredicted RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 RIT2Q99578 217 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 NPHS2Q9NP85 383 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 XPO7Q9UIA9 1087 aaKnown RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 CDYLQ9Y232 598 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 PDGFRAP16234 1089 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 TMEM132DQ14C87 1099 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 E4F1Q66K89 784 aaPredicted RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 UNC45AQ9H3U1 944 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 RPAP3Q9H6T3 665 aaPredicted RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 PNPLA6Q8IY17 1366 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 TLR2O60603 784 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 MOCS2O96007 188 aaPredicted RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 LCP1P13796 627 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 DEFA1P59665 94 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 DEFA3P59666 94 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 GRID1Q9ULK0 1009 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 POLIQ9UNA4 740 aa18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 FAM32AQ9Y421 112 aaKnown RBP18.24■□□□□ 0.51
HMGXB3-206ENST00000613459 FAM107AO95990 144 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 NCOA4Q13772 614 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 CCDC85BQ15834 202 aaPredicted RBP18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 BTNL9Q6UXG8 535 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 CATSPERBQ9H7T0 1116 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 RIC8BQ9NVN3 520 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 C5orf58C9J3I9 102 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 FXR2P51116 673 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■□ 24.4
HMGXB3-206ENST00000613459 FAM182BQ5T319 152 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 JAMLQ86YT9 394 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 HNRNPLLQ8WVV9 542 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 SIK2Q9H0K1 926 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 VPS9D1Q9Y2B5 631 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 FOXN1O15353 648 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 H2AFYO75367 372 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 SNRNP35Q16560 246 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 RNF135Q8IUD6 432 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 ANKMY2Q8IV38 441 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 MOV10L1Q9BXT6 1211 aaKnown RBP18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 SELENONQ9NZV5 590 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 WDR72Q3MJ13 1102 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 CYFIP2Q96F07 1278 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 AKAP10O43572 662 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 FNTAP49354 379 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 PTK6Q13882 451 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 DMC1Q14565 340 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 COG2Q14746 738 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 THEMIS2Q5TEJ8 643 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 IGDCC4Q8TDY8 1250 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 PTPRN2Q92932 1015 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 EME1Q96AY2 570 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 TEX13BQ9BXU2 312 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 ZNF556Q9HAH1 456 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 GLI2P10070 1586 aa18.23■□□□□ 0.51
HMGXB3-206ENST00000613459 ZNF185O15231 689 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 POLBP06746 335 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 CYP2C8P10632 490 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 LSP1P33241 339 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 PLA2G4AP47712 749 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 RGS4P49798 205 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 SESN2P58004 480 aaPredicted RBP18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 ATG9AQ7Z3C6 839 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 DTX3LQ8TDB6 740 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 AGAP1Q9UPQ3 857 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 FBXW4P57775 412 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 KBTBD12Q3ZCT8 623 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 CLMNQ96JQ2 1002 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 C17orf75Q9HAS0 396 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 ANKEF1Q9NU02 776 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 CCT8L1PA6NM43 557 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 PRPF4O43172 522 aaKnown RBP eCLIP18.22■□□□□ 0.513e-7■■■■□ 23.9
HMGXB3-206ENST00000613459 MUTP22033 750 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 USP10Q14694 798 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 MTF1Q14872 753 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 SV2CQ496J9 727 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 SEPT1Q8WYJ6 367 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 RAB6BQ9NRW1 208 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 PDP2Q9P2J9 529 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 PHF20L1A8MW92 1017 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 EEF2KO00418 725 aaKnown RBP18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 ZSCAN9O15535 394 aaPredicted RBP18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 PTK7Q13308 1070 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 STRIP1Q5VSL9 837 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 DPF2Q92785 391 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 OSBPL8Q9BZF1 889 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
HMGXB3-206ENST00000613459 LONRF1Q17RB8 773 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 EFHC1Q5JVL4 640 aa18.21■□□□□ 0.51
HMGXB3-206ENST00000613459 STOX1Q6ZVD7 989 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms