RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ALDH1A1P00352 501 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 PTGER2P43116 358 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 HERVK_113P62684 666 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 ERVK-24P63145 666 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 CUL2Q13617 745 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 MEA1Q16626 185 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 ZPBP2Q6X784 338 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 SLC9A9Q8IVB4 645 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 RNF139Q8WU17 664 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 GORASP1Q9BQQ3 440 aa9.19□□□□□ -0.94
PDE6A-204ENST00000613228 GBA2Q9HCG7 927 aaPredicted RBP9.19□□□□□ -0.94
PDE6A-204ENST00000613228 C17orf102A2RUQ5 167 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 CFAP69A5D8W1 941 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 KRT75O95678 551 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 MCF2P10911 925 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 SLC9A1P19634 815 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 RAD23BP54727 409 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PDIK1LQ8N165 341 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ETNPPLQ8TBG4 499 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PIP4K2CQ8TBX8 421 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 MED15Q96RN5 788 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PFDN4Q9NQP4 134 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 H3BRJ5 948 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PSMD3O43242 534 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 CYP2C8P10632 490 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 MARSP56192 900 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 CDR2Q01850 454 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ADAT2Q7Z6V5 191 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ZNF410Q86VK4 478 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 MAP4K3Q8IVH8 894 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 SRRM1Q8IYB3 904 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ARL10Q8N8L6 244 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 DUSP9Q99956 384 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 BTNL10A8MVZ5 291 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 KLRC4O43908 158 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 KRT10P13645 584 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 MLH1P40692 756 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 NOP14P78316 857 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PHEXP78562 749 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 NOL9Q5SY16 702 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 APPL2Q8NEU8 664 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ATL2Q8NHH9 583 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 KCNV2Q8TDN2 545 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 HAS1Q92839 578 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 FAM149B1Q96BN6 582 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 HIC2Q96JB3 615 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 RNPC3Q96LT9 517 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PJA2O43164 708 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 CELF2O95319 508 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 BAG2O95816 211 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ACTN1P12814 892 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 RARRES1P49788 294 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 NEK2P51955 445 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 YWHAGP61981 247 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 C1orf186Q6ZWK4 172 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 NANOGNBQ7Z5D8 188 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 LRRC8CQ8TDW0 803 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 CCT6BQ92526 530 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 MTMR8Q96EF0 704 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 CARD9Q9H257 536 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 NFU1Q9UMS0 254 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 UBQLN1Q9UMX0 589 aaKnown RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 SIPA1L3O60292 1781 aaPredicted RBP9.18□□□□□ -0.94
PDE6A-204ENST00000613228 TIAM2Q8IVF5 1701 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 UNCXA6NJT0 531 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 TOM1L1O75674 476 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PPP1R37O75864 691 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 PMS2P54278 862 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 C11orf63Q6NUN7 778 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 SLC30A10Q6XR72 485 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 CTAGE3PQ8IX95 158 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 SOCS4Q8WXH5 440 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 C18orf8Q96DM3 657 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 SEPT10Q9P0V9 454 aa9.18□□□□□ -0.94
PDE6A-204ENST00000613228 ZMYM2Q9UBW7 1377 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 SRGAP2O75044 1071 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 SKAP2O75563 359 aaPredicted RBP9.17□□□□□ -0.94
PDE6A-204ENST00000613228 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
PDE6A-204ENST00000613228 ESRRGP62508 458 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 SNX1Q13596 522 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 LRRC43Q8N309 656 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 CALN1Q9BXU9 219 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 ECT2Q9H8V3 914 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 IL1RAPL1Q9NZN1 696 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 UBR2Q8IWV8 1755 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 TRAPPC3O43617 180 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 KDM1AO60341 852 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 IL17AQ16552 155 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 OLFML2BQ68BL8 750 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 ITPRIPL1Q6GPH6 555 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 TRMT10CQ7L0Y3 403 aaKnown RBP9.17□□□□□ -0.94
PDE6A-204ENST00000613228 VSIG10LQ86VR7 867 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 C12orf56Q8IXR9 622 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 KDM4CQ9H3R0 1056 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 HPCAL4Q9UM19 191 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 PLAAQ9Y263 795 aa9.17□□□□□ -0.94
PDE6A-204ENST00000613228 A8MXQ7 604 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms