RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TRDMT1O14717 391 aaKnown RBP7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TSPAN1O60635 241 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RNF40O75150 1001 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DDAH1O94760 285 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 EGFP01133 1207 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SRGAP2CP0DJJ0 459 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ABCG1P45844 678 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DHPSP49366 369 aaPredicted RBP7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ANTXR2P58335 489 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ANAPC15P60006 121 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ROR1Q01973 937 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CFHR1Q03591 330 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 AP3B2Q13367 1082 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NAB2Q15742 525 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ARHGAP29Q52LW3 1261 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 XKR3Q5GH77 459 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 WWC2Q6AWC2 1192 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLC8B1Q6J4K2 584 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CD300LGQ6UXG3 332 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SYT13Q7L8C5 426 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TMPRSS7Q7RTY8 843 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 HEATR3Q7Z4Q2 680 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SLCO6A1Q86UG4 719 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GPIHBP1Q8IV16 184 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ARID3BQ8IVW6 561 aaPredicted RBP7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MB21D2Q8IYB1 491 aaPredicted RBP7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SHKBP1Q8TBC3 707 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PIP4K2CQ8TBX8 421 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CCDC51Q96ER9 411 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CAMK1GQ96NX5 476 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FBRSL1Q9HCM7 1045 aaKnown RBP7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CEP72Q9P209 647 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PTPN13Q12923 2485 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ZMYM2Q9UBW7 1377 aa7.96□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PCDH15Q96QU1 1955 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TRABD2BA6NFA1 517 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CAPN8A6NHC0 703 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PYCARD-AS1I3L0S3 204 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TNFRSF10BO14763 440 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MYL4P12829 197 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ATF2P15336 505 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ITPKBP27987 946 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 AXLP30530 894 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ELF1P32519 619 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LIFRP42702 1097 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DGKEP52429 567 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SETQ01105 290 aaPredicted RBP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 GRSF1Q12849 480 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DMC1Q14565 340 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 C8orf34Q49A92 452 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 USP39Q53GS9 565 aaKnown RBP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PEAR1Q5VY43 1037 aaPredicted RBP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 NOTUMQ6P988 496 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TOGARAM2Q6ZUX3 1019 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 DHX32Q7L7V1 743 aaKnown RBP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SYT12Q8IV01 421 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TMEFF1Q8IYR6 380 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FBXL16Q8N461 479 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 HDDC3Q8N4P3 179 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CCDC82Q8N4S0 544 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LEMD2Q8NC56 503 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PRPF31Q8WWY3 499 aaKnown RBP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LENG9Q96B70 501 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CPB2Q96IY4 423 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LRRC3Q9BY71 257 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TM6SF1Q9BZW5 370 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CXCL16Q9H2A7 254 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 UPF2Q9HAU5 1272 aaKnown RBP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CYP4F11Q9HBI6 524 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 POLMQ9NP87 494 aaPredicted RBP7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 FSCN3Q9NQT6 498 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TCEAL9Q9UHQ7 104 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 INSL5Q9Y5Q6 135 aa7.95□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MYO16Q9Y6X6 1858 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SMCO2A6NFE2 343 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 OTOL1A6NHN0 477 aaPredicted RBP7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PRRG1O14668 218 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PTGESO14684 152 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CAPN9O14815 690 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ADAMTS3O15072 1205 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 EDIL3O43854 480 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SH3BP5O60239 455 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 OPHN1O60890 802 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 TKTP29401 623 aaKnown RBP7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 SFNP31947 248 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 CIITAP33076 1130 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PTGER3P43115 390 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ADCY7P51828 1080 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 LAMTOR4Q0VGL1 99 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MAPK6Q16659 721 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 AMHR2Q16671 573 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ITPRIPL2Q3MIP1 535 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 PRR16Q569H4 304 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 STXBP5Q5T5C0 1151 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 IQCEQ6IPM2 695 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ANKS3Q6ZW76 656 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 ANO5Q75V66 913 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 HAUS6Q7Z4H7 955 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 RASSF3Q86WH2 238 aa7.94□□□□□ -1.14
PTCHD3P1-201ENST00000612350 MARCH9Q86YJ5 346 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms