RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	NCOA4	Q13772	614 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	CYP4F22	Q6NT55	531 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	XRRA1	Q6P2D8	792 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	ENOSF1	Q7L5Y1	443 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	CCDC13	Q8IYE1	715 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	LRRC71	Q8N4P6	559 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	TAB3	Q8N5C8	712 aa	Predicted RBP	13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	ZBTB10	Q96DT7	871 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	PGM2	Q96G03	612 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	PAGR1	Q9BTK6	254 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	TP73	O15350	636 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	DRD4	P21917	467 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	CALR	P27797	417 aa	Known RBP	13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	MAMLD1	Q13495	774 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	TMEM132A	Q24JP5	1023 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	CATSPERG	Q6ZRH7	1159 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	C15orf39	Q6ZRI6	1047 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	MON1B	Q7L1V2	547 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	SPATS2	Q86XZ4	545 aa	Known RBP	13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	TMEM130	Q8N3G9	435 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	GDAP1	Q8TB36	358 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	MIEF2	Q96C03	454 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	JPH2	Q9BR39	696 aa	Predicted RBP	13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	FAM129A	Q9BZQ8	928 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	DCLK3	Q9C098	648 aa		13.7	□□□□□ -0.22
SMTN-222	ENST00000612341	PROSC	O94903	275 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	WEE2	P0C1S8	567 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	FDX1	P10109	184 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	HNRNPH1	P31943	449 aa	Known RBP	13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	MMP13	P45452	471 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	BPIFB4	P59827	614 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	NCAPG2	Q86XI2	1143 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	ARHGEF2	Q92974	986 aa	Known RBP	13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	SNF8	Q96H20	258 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	OSBPL8	Q9BZF1	889 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	MTMR12	Q9C0I1	747 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	PORCN	Q9H237	461 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	DNM1L	O00429	736 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	GJB1	P08034	283 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	ZSCAN5DP	P0CG00	497 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	POTEJ	P0CG39	1038 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	ACO1	P21399	889 aa	Known RBP	13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	NOMO3	P69849	1222 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	CENPC	Q03188	943 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	MTM1	Q13496	603 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	FAM182A	Q5T1J6	154 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	EXOC3L1	Q86VI1	746 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	ABRA	Q8N0Z2	381 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	VPS33B	Q9H267	617 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	R3HDML	Q9H3Y0	253 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	AGT	P01019	485 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	CLTA	P09496	248 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	GBP1	P32455	592 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	TFAM	Q00059	246 aa	Known RBP	13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	TREML2	Q5T2D2	321 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	C6orf89	Q6UWU4	347 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	PPP1R16B	Q96T49	567 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	IMPG2	Q9BZV3	1241 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	KIAA1586	Q9HCI6	787 aa		13.69	□□□□□ -0.22
SMTN-222	ENST00000612341	CYP1A1	P04798	512 aa	Predicted RBP	13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	UBA1	P22314	1058 aa	Known RBP	13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	PLCB3	Q01970	1234 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	ORC1	Q13415	861 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	CAPS	Q13938	189 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	LY6K	Q17RY6	165 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	CYP4A22	Q5TCH4	519 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	KCNV1	Q6PIU1	500 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	RHOT1	Q8IXI2	618 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	THNSL1	Q8IYQ7	743 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	GLIS1	Q8NBF1	620 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	ATL2	Q8NHH9	583 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	GIMAP7	Q8NHV1	300 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	PRPF31	Q8WWY3	499 aa	Known RBP	13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	ZNF606	Q8WXB4	792 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	MCEE	Q96PE7	176 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	HOXC10	Q9NYD6	342 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	KIF3C	O14782	793 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	CP	P00450	1065 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	ETS1	P14921	441 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	MYL6	P60660	151 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	SPDYC	Q5MJ68	293 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	WDR78	Q5VTH9	848 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	DCUN1D2	Q6PH85	259 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	RUNDC3B	Q96NL0	473 aa		13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	DHX33	Q9H6R0	707 aa	Known RBP	13.68	□□□□□ -0.22
SMTN-222	ENST00000612341	LOXHD1	Q8IVV2	1947 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341		F8VP50	259 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341		H0YCG3	227 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	IFNB1	P01574	187 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	PAEP	P09466	180 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	ITIH2	P19823	946 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	NAMPT	P43490	491 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	C12orf50	Q8NA57	414 aa	Predicted RBP	13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	KLRG1	Q96E93	195 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	C10orf88	Q9H8K7	445 aa		13.67	□□□□□ -0.22
SMTN-222	ENST00000612341	AVEN	Q9NQS1	362 aa	Predicted RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms