RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TMC3Q7Z5M5 1100 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 PNMA8AQ86V59 439 aaPredicted RBP14.51□□□□□ -0.09
NEK3-205ENST00000610828 CD302Q8IX05 232 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 SH2D3CQ8N5H7 860 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 UBR7Q8N806 425 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 AFG1LQ8WV93 481 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 ANKRD36BP1Q96IX9 119 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 MS4A4AQ96JQ5 239 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 CDT1Q9H211 546 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 IFT122Q9HBG6 1241 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 MRPL47Q9HD33 250 aaKnown RBP14.51□□□□□ -0.09
NEK3-205ENST00000610828 PTPN22Q9Y2R2 807 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 SNX24Q9Y343 169 aa14.51□□□□□ -0.09
NEK3-205ENST00000610828 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.51□□□□□ -0.09
NEK3-205ENST00000610828 PLXNA1Q9UIW2 1896 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 TNNC2P02585 160 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 KRT19P08727 400 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 WEE2P0C1S8 567 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 PHKA2P46019 1235 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 MAMLD1Q13495 774 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 PHF13Q86YI8 300 aaPredicted RBP14.5□□□□□ -0.09
NEK3-205ENST00000610828 TMEM192Q8IY95 271 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 OR2W6PQ8NHA6 318 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 VCPIP1Q96JH7 1222 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 RPF1Q9H9Y2 349 aaKnown RBP14.5□□□□□ -0.09
NEK3-205ENST00000610828 VTA1Q9NP79 307 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 AKT3Q9Y243 479 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 TNFSF13BQ9Y275 285 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 PLXNB2O15031 1838 aa14.5□□□□□ -0.09
NEK3-205ENST00000610828 A0A087WZ62 844 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 B4GALT4O60513 344 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 PROSCO94903 275 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 BRD2P25440 801 aaKnown RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 COILP38432 576 aaPredicted RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 KCNJ1P48048 391 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 PLTPP55058 493 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 MTMR3Q13615 1198 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 SIX1Q15475 284 aaPredicted RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 CYP1B1Q16678 543 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 PPTC7Q8NI37 304 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 FDXACB1Q9BRP7 624 aaPredicted RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 PRMT7Q9NVM4 692 aaPredicted RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 NXF1Q9UBU9 619 aaKnown RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 SCINQ9Y6U3 715 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 GOLGA6L10A6NI86 522 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 PODXLO00592 558 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 TLR3O15455 904 aaKnown RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 ERLIN2O94905 339 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 GJB6O95452 261 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 GTF2A2P52657 109 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 SGO2Q562F6 1265 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 PPP1R2P3Q6NXS1 205 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 MAMDC4Q6UXC1 1216 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.49□□□□□ -0.09
NEK3-205ENST00000610828 NFKBIZQ9BYH8 718 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 CENPHQ9H3R5 247 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 ATP8A1Q9Y2Q0 1164 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 SCN4AP35499 1836 aa14.49□□□□□ -0.09
NEK3-205ENST00000610828 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.48□□□□□ -0.09
NEK3-205ENST00000610828 GPR25O00155 361 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 VTNP04004 478 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 SSR1P43307 286 aaKnown RBP14.48□□□□□ -0.09
NEK3-205ENST00000610828 HNRNPH2P55795 449 aaKnown RBP14.48□□□□□ -0.09
NEK3-205ENST00000610828 PTP4A2Q12974 167 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 GPR162Q16538 588 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 PLEKHA7Q6IQ23 1121 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 LRIG3Q6UXM1 1119 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 DPP9Q86TI2 863 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 CCDC50Q8IVM0 306 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 BRI3BPQ8WY22 251 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 XYLT2Q9H1B5 865 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 ZDHHC18Q9NUE0 388 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 PARVAQ9NVD7 372 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 USTQ9Y2C2 406 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 O00370 1275 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 FSCN2O14926 492 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 MAGEB2O15479 319 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 STRNO43815 780 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 MMP8P22894 467 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 GJC1P36383 396 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 ASPAP45381 313 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 RPL21P46778 160 aaKnown RBP14.48□□□□□ -0.09
NEK3-205ENST00000610828 DRG2P55039 364 aaKnown RBP14.48□□□□□ -0.09
NEK3-205ENST00000610828 C1orf131Q8NDD1 294 aaKnown RBP14.48□□□□□ -0.09
NEK3-205ENST00000610828 FBXO25Q8TCJ0 367 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 C1orf54Q8WWF1 131 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 DDX27Q96GQ7 796 aaKnown RBP14.48□□□□□ -0.09
NEK3-205ENST00000610828 CPB2Q96IY4 423 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 RUNDC3BQ96NL0 473 aa14.48□□□□□ -0.09
NEK3-205ENST00000610828 MGAMO43451 1857 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 H0YGN5 161 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 IL18RAPO95256 599 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 SNAI1O95863 264 aaPredicted RBP14.47□□□□□ -0.09
NEK3-205ENST00000610828 NFICP08651 508 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 MYZAPP0CAP1 466 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 TMOD1P28289 359 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 FNTAP49354 379 aa14.47□□□□□ -0.09
NEK3-205ENST00000610828 FEZF2Q8TBJ5 459 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms